Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 ABR-204ENST00000543210 1049 ntTSL 2 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 AC091304.2-201ENST00000564639 760 ntBASIC28.35■■■□□ 2.13
ABCA6Q8N139 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC28.35■■■□□ 2.13
ABCA6Q8N139 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC28.35■■■□□ 2.13
ABCA6Q8N139 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 ME2-216ENST00000639850 2331 ntTSL 5 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 BAALC-202ENST00000306391 243 ntTSL 5 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 BAALC-204ENST00000330955 222 ntTSL 5 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 MCCD1P1-208ENST00000445732 328 ntBASIC28.34■■■□□ 2.13
ABCA6Q8N139 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
ABCA6Q8N139 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ABCA6Q8N139 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 AL390719.2-201ENST00000606993 987 ntBASIC28.33■■■□□ 2.13
ABCA6Q8N139 AC139530.3-201ENST00000620344 690 ntBASIC28.33■■■□□ 2.13
ABCA6Q8N139 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 AC233702.3-201ENST00000578656 1387 ntBASIC28.33■■■□□ 2.13
ABCA6Q8N139 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
ABCA6Q8N139 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ABCA6Q8N139 TEX30-205ENST00000376029 959 ntTSL 2 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 BET1L-206ENST00000486280 665 ntTSL 3 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ABCA6Q8N139 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ABCA6Q8N139 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ABCA6Q8N139 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ABCA6Q8N139 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC28.32■■■□□ 2.12
ABCA6Q8N139 BX640515.1-201ENST00000617215 977 ntBASIC28.32■■■□□ 2.12
ABCA6Q8N139 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ABCA6Q8N139 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 PMS2P1-201ENST00000431037 1228 ntBASIC28.31■■■□□ 2.12
ABCA6Q8N139 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 AC079776.4-201ENST00000511039 504 ntBASIC28.31■■■□□ 2.12
ABCA6Q8N139 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 CALM3-211ENST00000598871 561 ntTSL 4 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 AL353801.3-201ENST00000609898 542 ntBASIC28.31■■■□□ 2.12
ABCA6Q8N139 NME4-212ENST00000621774 904 ntTSL 3 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ABCA6Q8N139 ZNF815P-204ENST00000434898 1737 ntBASIC28.31■■■□□ 2.12
ABCA6Q8N139 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC28.31■■■□□ 2.12
ABCA6Q8N139 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC28.3■■■□□ 2.12
ABCA6Q8N139 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC28.3■■■□□ 2.12
ABCA6Q8N139 GAS2L1P1-201ENST00000420145 1480 ntBASIC28.3■■■□□ 2.12
ABCA6Q8N139 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC28.3■■■□□ 2.12
ABCA6Q8N139 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms