Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AC073111.5-205ENST00000641717 521 ntBASIC19.19■□□□□ 0.66
PACS2Q86VP3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 ABALON-201ENST00000629058 1903 ntBASIC19.19■□□□□ 0.66
PACS2Q86VP3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS2Q86VP3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PACS2Q86VP3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 AC061975.6-201ENST00000579045 1553 ntBASIC19.18■□□□□ 0.66
PACS2Q86VP3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 AC073592.3-201ENST00000625118 1834 ntBASIC19.18■□□□□ 0.66
PACS2Q86VP3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS2Q86VP3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS2Q86VP3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 CDCA4P2-201ENST00000441182 718 ntBASIC19.17■□□□□ 0.66
PACS2Q86VP3 AC026185.1-201ENST00000445748 174 ntBASIC19.17■□□□□ 0.66
PACS2Q86VP3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 AC231657.2-201ENST00000624556 255 ntBASIC19.17■□□□□ 0.66
PACS2Q86VP3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS2Q86VP3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PACS2Q86VP3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
PACS2Q86VP3 AC010536.3-201ENST00000620306 533 ntBASIC19.16■□□□□ 0.66
PACS2Q86VP3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.16■□□□□ 0.66
PACS2Q86VP3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms