Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 AP005901.3-202ENST00000581653 237 ntBASIC16.6■□□□□ 0.25
LRRK2Q5S007 AC099336.1-202ENST00000602961 463 ntBASIC16.6■□□□□ 0.25
LRRK2Q5S007 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 FAM8A3P-201ENST00000427218 844 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 PLK5-205ENST00000642079 1969 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 SMG8-203ENST00000578922 2178 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 AC211486.1-202ENST00000416371 468 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 AC211476.1-201ENST00000503899 468 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.59■□□□□ 0.25
LRRK2Q5S007 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRK2Q5S007 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRK2Q5S007 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRK2Q5S007 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRK2Q5S007 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRK2Q5S007 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
LRRK2Q5S007 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRK2Q5S007 MED15P5-201ENST00000423150 992 ntBASIC16.58■□□□□ 0.25
LRRK2Q5S007 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
LRRK2Q5S007 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRK2Q5S007 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.58■□□□□ 0.25
LRRK2Q5S007 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRK2Q5S007 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRK2Q5S007 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 DNAJB3-201ENST00000446806 729 ntBASIC16.58■□□□□ 0.24
LRRK2Q5S007 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRK2Q5S007 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 AL591424.1-201ENST00000442569 1213 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 RFPL4AP1-201ENST00000530883 850 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 MIR3917-201ENST00000580971 93 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 AC239800.4-201ENST00000603712 296 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 SCARNA2-201ENST00000458748 420 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 BNIP3P18-201ENST00000593976 575 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRK2Q5S007 AL356488.2-201ENST00000602755 427 ntBASIC16.57■□□□□ 0.24
LRRK2Q5S007 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRK2Q5S007 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRK2Q5S007 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms