Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXF1Q12946 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXF1Q12946 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.32■□□□□ 0.36
FOXF1Q12946 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXF1Q12946 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FOXF1Q12946 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FOXF1Q12946 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FOXF1Q12946 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXF1Q12946 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 IRX1P1-201ENST00000438849 1838 ntBASIC17.31■□□□□ 0.36
FOXF1Q12946 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 KRT17P2-201ENST00000300992 1314 ntBASIC17.31■□□□□ 0.36
FOXF1Q12946 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FOXF1Q12946 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXF1Q12946 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXF1Q12946 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.31■□□□□ 0.36
FOXF1Q12946 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 DGCR10-201ENST00000609839 495 ntBASIC17.31■□□□□ 0.36
FOXF1Q12946 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXF1Q12946 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXF1Q12946 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.31■□□□□ 0.36
FOXF1Q12946 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXF1Q12946 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXF1Q12946 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXF1Q12946 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOXF1Q12946 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXF1Q12946 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.3■□□□□ 0.36
FOXF1Q12946 AL355075.4-201ENST00000554988 638 ntBASIC17.3■□□□□ 0.36
FOXF1Q12946 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 AP000692.2-201ENST00000608391 879 ntBASIC17.3■□□□□ 0.36
FOXF1Q12946 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXF1Q12946 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
FOXF1Q12946 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXF1Q12946 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXF1Q12946 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXF1Q12946 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXF1Q12946 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXF1Q12946 RBM17P1-201ENST00000453646 1190 ntBASIC17.29■□□□□ 0.36
FOXF1Q12946 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXF1Q12946 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXF1Q12946 PRSS44-201ENST00000515154 1146 ntBASIC17.29■□□□□ 0.36
FOXF1Q12946 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXF1Q12946 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
FOXF1Q12946 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXF1Q12946 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXF1Q12946 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXF1Q12946 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXF1Q12946 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
FOXF1Q12946 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXF1Q12946 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXF1Q12946 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms