Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.67■■□□□ 1.06
LBX1P52954 MIR5100-201ENST00000579544 119 ntBASIC21.67■■□□□ 1.06
LBX1P52954 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LBX1P52954 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LBX1P52954 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
LBX1P52954 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.66■■□□□ 1.06
LBX1P52954 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.66■■□□□ 1.06
LBX1P52954 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.66■■□□□ 1.06
LBX1P52954 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.66■■□□□ 1.06
LBX1P52954 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.66■■□□□ 1.06
LBX1P52954 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LBX1P52954 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LBX1P52954 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.66■■□□□ 1.06
LBX1P52954 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.65■■□□□ 1.06
LBX1P52954 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.65■■□□□ 1.06
LBX1P52954 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.65■■□□□ 1.06
LBX1P52954 AC004832.2-201ENST00000426397 482 ntBASIC21.65■■□□□ 1.06
LBX1P52954 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 AC132008.2-207ENST00000454517 770 ntBASIC21.65■■□□□ 1.06
LBX1P52954 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.65■■□□□ 1.06
LBX1P52954 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 GUSBP12-201ENST00000513727 720 ntBASIC21.65■■□□□ 1.06
LBX1P52954 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.65■■□□□ 1.06
LBX1P52954 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.65■■□□□ 1.06
LBX1P52954 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.65■■□□□ 1.06
LBX1P52954 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LBX1P52954 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.65■■□□□ 1.06
LBX1P52954 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.65■■□□□ 1.06
LBX1P52954 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.65■■□□□ 1.06
LBX1P52954 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
LBX1P52954 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LBX1P52954 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
LBX1P52954 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LBX1P52954 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
LBX1P52954 AL645939.2-201ENST00000427340 991 ntBASIC21.64■■□□□ 1.05
LBX1P52954 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.64■■□□□ 1.05
LBX1P52954 RN7SL606P-201ENST00000472779 293 ntBASIC21.64■■□□□ 1.05
LBX1P52954 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LBX1P52954 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.64■■□□□ 1.05
LBX1P52954 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
LBX1P52954 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.64■■□□□ 1.05
LBX1P52954 C1orf229-201ENST00000623686 2258 ntBASIC21.64■■□□□ 1.05
LBX1P52954 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LBX1P52954 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LBX1P52954 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LBX1P52954 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.63■■□□□ 1.05
LBX1P52954 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.63■■□□□ 1.05
LBX1P52954 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.63■■□□□ 1.05
LBX1P52954 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.63■■□□□ 1.05
LBX1P52954 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.63■■□□□ 1.05
LBX1P52954 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.63■■□□□ 1.05
LBX1P52954 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.63■■□□□ 1.05
LBX1P52954 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LBX1P52954 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
LBX1P52954 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LBX1P52954 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.62■■□□□ 1.05
LBX1P52954 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.62■■□□□ 1.05
LBX1P52954 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.62■■□□□ 1.05
LBX1P52954 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.62■■□□□ 1.05
LBX1P52954 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.62■■□□□ 1.05
LBX1P52954 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LBX1P52954 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.62■■□□□ 1.05
LBX1P52954 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms