Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGA2P52926 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HMGA2P52926 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGA2P52926 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HMGA2P52926 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGA2P52926 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMGA2P52926 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGA2P52926 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.46■□□□□ 0.39
HMGA2P52926 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGA2P52926 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.46■□□□□ 0.39
HMGA2P52926 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGA2P52926 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGA2P52926 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGA2P52926 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGA2P52926 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGA2P52926 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMGA2P52926 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMGA2P52926 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGA2P52926 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
HMGA2P52926 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGA2P52926 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 AC018470.1-201ENST00000624790 3129 ntBASIC17.45■□□□□ 0.38
HMGA2P52926 AC026185.1-201ENST00000445748 174 ntBASIC17.45■□□□□ 0.38
HMGA2P52926 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGA2P52926 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGA2P52926 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGA2P52926 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGA2P52926 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGA2P52926 AC068880.1-201ENST00000507289 2297 ntBASIC17.45■□□□□ 0.38
HMGA2P52926 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.45■□□□□ 0.38
HMGA2P52926 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HMGA2P52926 AL162741.1-201ENST00000565563 1558 ntBASIC17.45■□□□□ 0.38
HMGA2P52926 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGA2P52926 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.44■□□□□ 0.38
HMGA2P52926 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGA2P52926 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.44■□□□□ 0.38
HMGA2P52926 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.44■□□□□ 0.38
HMGA2P52926 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 AC092437.1-201ENST00000624794 1048 ntBASIC17.44■□□□□ 0.38
HMGA2P52926 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HMGA2P52926 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
HMGA2P52926 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.44■□□□□ 0.38
HMGA2P52926 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGA2P52926 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGA2P52926 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGA2P52926 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGA2P52926 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGA2P52926 MIR5787-201ENST00000611784 55 ntBASIC17.43■□□□□ 0.38
HMGA2P52926 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 AC092368.3-202ENST00000574180 1591 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms