Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
TPRP12270 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.94■□□□□ 0.46
TPRP12270 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPRP12270 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPRP12270 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPRP12270 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPRP12270 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.93■□□□□ 0.46
TPRP12270 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 HLA-V-201ENST00000429037 534 ntBASIC17.93■□□□□ 0.46
TPRP12270 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.93■□□□□ 0.46
TPRP12270 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 Z83836.1-201ENST00000624605 1642 ntBASIC17.93■□□□□ 0.46
TPRP12270 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.93■□□□□ 0.46
TPRP12270 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPRP12270 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.93■□□□□ 0.46
TPRP12270 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.93■□□□□ 0.46
TPRP12270 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.93■□□□□ 0.46
TPRP12270 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.92■□□□□ 0.46
TPRP12270 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.92■□□□□ 0.46
TPRP12270 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.92■□□□□ 0.46
TPRP12270 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPRP12270 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.91■□□□□ 0.46
TPRP12270 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.91■□□□□ 0.46
TPRP12270 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.91■□□□□ 0.46
TPRP12270 AC190387.1-201ENST00000551683 408 ntBASIC17.91■□□□□ 0.46
TPRP12270 FAM197Y3-203ENST00000618346 717 ntBASIC17.91■□□□□ 0.46
TPRP12270 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.91■□□□□ 0.46
TPRP12270 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.91■□□□□ 0.46
TPRP12270 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 KRT8P41-201ENST00000533985 1514 ntBASIC17.91■□□□□ 0.46
TPRP12270 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.91■□□□□ 0.46
TPRP12270 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
TPRP12270 AL049840.3-201ENST00000602669 611 ntBASIC17.91■□□□□ 0.46
TPRP12270 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPRP12270 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.9■□□□□ 0.46
TPRP12270 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.9■□□□□ 0.46
TPRP12270 AC112482.1-201ENST00000492080 688 ntBASIC17.9■□□□□ 0.46
TPRP12270 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.9■□□□□ 0.46
TPRP12270 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 AL117328.2-201ENST00000624617 1940 ntBASIC17.9■□□□□ 0.46
TPRP12270 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TPRP12270 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.9■□□□□ 0.46
TPRP12270 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TPRP12270 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.9■□□□□ 0.46
TPRP12270 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.9■□□□□ 0.46
TPRP12270 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 MIR1199-201ENST00000621445 119 ntBASIC17.9■□□□□ 0.46
TPRP12270 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPRP12270 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TPRP12270 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.9■□□□□ 0.46
TPRP12270 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TPRP12270 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TPRP12270 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms