Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HOXC6P09630 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.6■■□□□ 1.05
HOXC6P09630 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HOXC6P09630 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
HOXC6P09630 AC011498.5-201ENST00000592027 486 ntBASIC21.6■■□□□ 1.05
HOXC6P09630 AC092329.2-201ENST00000598402 547 ntBASIC21.6■■□□□ 1.05
HOXC6P09630 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.6■■□□□ 1.05
HOXC6P09630 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HOXC6P09630 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.6■■□□□ 1.05
HOXC6P09630 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.59■■□□□ 1.05
HOXC6P09630 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HOXC6P09630 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.59■■□□□ 1.05
HOXC6P09630 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.59■■□□□ 1.05
HOXC6P09630 TSSC2-201ENST00000450217 709 ntBASIC21.59■■□□□ 1.05
HOXC6P09630 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.59■■□□□ 1.05
HOXC6P09630 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.59■■□□□ 1.05
HOXC6P09630 MIR3180-1-201ENST00000580374 94 ntBASIC21.59■■□□□ 1.05
HOXC6P09630 MIR3180-3-201ENST00000584616 94 ntBASIC21.59■■□□□ 1.05
HOXC6P09630 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.59■■□□□ 1.05
HOXC6P09630 AC016734.2-201ENST00000624325 1377 ntBASIC21.59■■□□□ 1.05
HOXC6P09630 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.59■■□□□ 1.05
HOXC6P09630 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HOXC6P09630 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.59■■□□□ 1.05
HOXC6P09630 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.58■■□□□ 1.05
HOXC6P09630 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.58■■□□□ 1.05
HOXC6P09630 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.58■■□□□ 1.05
HOXC6P09630 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
HOXC6P09630 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.58■■□□□ 1.05
HOXC6P09630 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC6P09630 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.58■■□□□ 1.05
HOXC6P09630 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.58■■□□□ 1.04
HOXC6P09630 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HOXC6P09630 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.57■■□□□ 1.04
HOXC6P09630 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 GPAT2P1-201ENST00000444924 1672 ntBASIC21.57■■□□□ 1.04
HOXC6P09630 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.57■■□□□ 1.04
HOXC6P09630 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.57■■□□□ 1.04
HOXC6P09630 RN7SL510P-201ENST00000581311 263 ntBASIC21.57■■□□□ 1.04
HOXC6P09630 AL121672.3-201ENST00000608644 468 ntBASIC21.57■■□□□ 1.04
HOXC6P09630 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.57■■□□□ 1.04
HOXC6P09630 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC6P09630 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC6P09630 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HOXC6P09630 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms