Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
CSPG5O95196 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 FEM1AP1-201ENST00000431297 1995 ntBASIC20.5■□□□□ 0.87
CSPG5O95196 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 KRT8P41-201ENST00000533985 1514 ntBASIC20.5■□□□□ 0.87
CSPG5O95196 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.5■□□□□ 0.87
CSPG5O95196 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.5■□□□□ 0.87
CSPG5O95196 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.5■□□□□ 0.87
CSPG5O95196 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.5■□□□□ 0.87
CSPG5O95196 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.5■□□□□ 0.87
CSPG5O95196 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
CSPG5O95196 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG5O95196 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG5O95196 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.49■□□□□ 0.87
CSPG5O95196 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.49■□□□□ 0.87
CSPG5O95196 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.49■□□□□ 0.87
CSPG5O95196 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.49■□□□□ 0.87
CSPG5O95196 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CSPG5O95196 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSPG5O95196 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CSPG5O95196 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG5O95196 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CSPG5O95196 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CSPG5O95196 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CSPG5O95196 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG5O95196 TSPY21P-201ENST00000433481 731 ntBASIC20.48■□□□□ 0.87
CSPG5O95196 TSPY23P-201ENST00000440136 739 ntBASIC20.48■□□□□ 0.87
CSPG5O95196 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG5O95196 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG5O95196 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG5O95196 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG5O95196 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG5O95196 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG5O95196 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG5O95196 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG5O95196 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG5O95196 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CSPG5O95196 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG5O95196 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG5O95196 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG5O95196 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG5O95196 AC246785.2-201ENST00000432512 513 ntBASIC20.47■□□□□ 0.87
CSPG5O95196 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms