Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.75■□□□□ 0.91
CEP290O15078 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CEP290O15078 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
CEP290O15078 AC244107.1-201ENST00000442033 332 ntBASIC20.74■□□□□ 0.91
CEP290O15078 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.74■□□□□ 0.91
CEP290O15078 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CEP290O15078 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.74■□□□□ 0.91
CEP290O15078 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CEP290O15078 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEP290O15078 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CEP290O15078 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.73■□□□□ 0.91
CEP290O15078 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.73■□□□□ 0.91
CEP290O15078 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.73■□□□□ 0.91
CEP290O15078 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CEP290O15078 AC083906.6-201ENST00000641366 219 ntBASIC20.73■□□□□ 0.91
CEP290O15078 AC079781.4-201ENST00000641908 219 ntBASIC20.73■□□□□ 0.91
CEP290O15078 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CEP290O15078 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CEP290O15078 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 MED15P5-201ENST00000423150 992 ntBASIC20.73■□□□□ 0.91
CEP290O15078 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.73■□□□□ 0.91
CEP290O15078 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.73■□□□□ 0.91
CEP290O15078 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CEP290O15078 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CEP290O15078 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.72■□□□□ 0.91
CEP290O15078 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.72■□□□□ 0.91
CEP290O15078 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.72■□□□□ 0.91
CEP290O15078 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.72■□□□□ 0.91
CEP290O15078 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CEP290O15078 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CEP290O15078 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CEP290O15078 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 AC004832.2-201ENST00000426397 482 ntBASIC20.72■□□□□ 0.91
CEP290O15078 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.72■□□□□ 0.91
CEP290O15078 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 RFPL4AP1-201ENST00000530883 850 ntBASIC20.72■□□□□ 0.91
CEP290O15078 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CEP290O15078 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.72■□□□□ 0.91
CEP290O15078 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEP290O15078 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.72■□□□□ 0.91
CEP290O15078 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.71■□□□□ 0.91
CEP290O15078 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.71■□□□□ 0.91
CEP290O15078 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.71■□□□□ 0.91
CEP290O15078 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.71■□□□□ 0.91
CEP290O15078 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEP290O15078 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.71■□□□□ 0.91
CEP290O15078 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.71■□□□□ 0.91
CEP290O15078 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.7■□□□□ 0.9
CEP290O15078 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 ZNF259P1-201ENST00000407656 1365 ntBASIC20.7■□□□□ 0.9
CEP290O15078 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.7■□□□□ 0.9
CEP290O15078 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.7■□□□□ 0.9
CEP290O15078 DNAJB3-201ENST00000446806 729 ntBASIC20.7■□□□□ 0.9
CEP290O15078 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.7■□□□□ 0.9
CEP290O15078 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.7■□□□□ 0.9
CEP290O15078 BNIP3P18-201ENST00000593976 575 ntBASIC20.7■□□□□ 0.9
CEP290O15078 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.7■□□□□ 0.9
CEP290O15078 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.7■□□□□ 0.9
CEP290O15078 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.7■□□□□ 0.9
CEP290O15078 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CEP290O15078 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CEP290O15078 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.69■□□□□ 0.9
CEP290O15078 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.69■□□□□ 0.9
CEP290O15078 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms