Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
CHD1O14646 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CHD1O14646 UPF3AP3-201ENST00000420996 769 ntBASIC31.03■■■□□ 2.56
CHD1O14646 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC31.03■■■□□ 2.56
CHD1O14646 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC31.03■■■□□ 2.56
CHD1O14646 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC31.02■■■□□ 2.56
CHD1O14646 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC31.02■■■□□ 2.56
CHD1O14646 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC31.02■■■□□ 2.56
CHD1O14646 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHD1O14646 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHD1O14646 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHD1O14646 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHD1O14646 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
CHD1O14646 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CHD1O14646 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC31.01■■■□□ 2.56
CHD1O14646 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 RPSAP43-201ENST00000402237 625 ntBASIC31.01■■■□□ 2.55
CHD1O14646 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC31.01■■■□□ 2.55
CHD1O14646 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC31.01■■■□□ 2.55
CHD1O14646 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC31.01■■■□□ 2.55
CHD1O14646 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CHD1O14646 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHD1O14646 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
CHD1O14646 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CHD1O14646 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHD1O14646 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHD1O14646 GRAMD4P1-201ENST00000435181 1110 ntBASIC31■■■□□ 2.55
CHD1O14646 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC31■■■□□ 2.55
CHD1O14646 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31■■■□□ 2.55
CHD1O14646 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC31■■■□□ 2.55
CHD1O14646 BNIP3P18-201ENST00000593976 575 ntBASIC31■■■□□ 2.55
CHD1O14646 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31■■■□□ 2.55
CHD1O14646 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHD1O14646 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC30.99■■■□□ 2.55
CHD1O14646 AL023284.2-201ENST00000405850 579 ntBASIC30.99■■■□□ 2.55
CHD1O14646 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC30.99■■■□□ 2.55
CHD1O14646 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC30.99■■■□□ 2.55
CHD1O14646 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC30.99■■■□□ 2.55
CHD1O14646 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
CHD1O14646 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1O14646 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 NMU-202ENST00000505262 693 ntTSL 3 BASIC30.98■■■□□ 2.55
CHD1O14646 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC30.98■■■□□ 2.55
CHD1O14646 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CHD1O14646 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
CHD1O14646 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD1O14646 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC30.98■■■□□ 2.55
CHD1O14646 GPX1P2-201ENST00000429271 606 ntBASIC30.98■■■□□ 2.55
CHD1O14646 AC112497.1-201ENST00000624824 639 ntBASIC30.98■■■□□ 2.55
CHD1O14646 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 IGHV3-22-201ENST00000520721 359 ntBASIC30.97■■■□□ 2.55
CHD1O14646 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.97■■■□□ 2.55
CHD1O14646 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1O14646 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHD1O14646 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC30.96■■■□□ 2.55
CHD1O14646 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC30.96■■■□□ 2.55
CHD1O14646 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHD1O14646 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
CHD1O14646 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHD1O14646 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHD1O14646 SMG8-203ENST00000578922 2178 ntBASIC30.96■■■□□ 2.55
CHD1O14646 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms