Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.17■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.16■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AC117947.1-201ENST00000427448 529 ntBASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
C1QTNF3-AMACRE9PGA6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 Z82202.1-201ENST00000623446 1880 ntBASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC139887.4-201ENST00000607877 719 ntBASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AL031432.5-201ENST00000641059 760 ntBASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 RNF152P1-201ENST00000397754 604 ntBASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AP000523.1-201ENST00000398242 1049 ntBASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.13■□□□□ 0.65
C1QTNF3-AMACRE9PGA6 AC022616.7-201ENST00000525383 220 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms