Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 AC135776.1-201ENST00000319817 2481 ntBASIC13.51□□□□□ -0.25
LINC01546A6NGU7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01546A6NGU7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 AL035685.1-201ENST00000636663 812 ntBASIC13.5□□□□□ -0.25
LINC01546A6NGU7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 AC093677.2-201ENST00000600169 1863 ntBASIC13.5□□□□□ -0.25
LINC01546A6NGU7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC01546A6NGU7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 EDA-201ENST00000338901 1233 ntBASIC13.49□□□□□ -0.25
LINC01546A6NGU7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 AL136116.3-201ENST00000402907 1138 ntBASIC13.49□□□□□ -0.25
LINC01546A6NGU7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01546A6NGU7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms