Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 AC104417.2-201ENST00000562989 1793 ntBASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.03■□□□□ -0
TRAV30A0A087WSZ9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PRKY-204ENST00000533551 1019 ntBASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.02■□□□□ -0
TRAV30A0A087WSZ9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 TEX21P-204ENST00000641479 1693 ntBASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 NEFHP1-201ENST00000412845 2629 ntBASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV30A0A087WSZ9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 OR6D1P-202ENST00000641007 5290 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 SOX15-203ENST00000570788 1093 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AL109923.1-201ENST00000618799 583 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AL161938.1-201ENST00000569833 2180 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 AC005332.8-201ENST00000622750 2735 ntBASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRAV30A0A087WSZ9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV30A0A087WSZ9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms