Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hcfc2Q9D968 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hcfc2Q9D968 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc2Q9D968 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcfc2Q9D968 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.52■□□□□ 0.4
Hcfc2Q9D968 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hcfc2Q9D968 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hcfc2Q9D968 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hcfc2Q9D968 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hcfc2Q9D968 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcfc2Q9D968 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcfc2Q9D968 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc2Q9D968 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hcfc2Q9D968 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc2Q9D968 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcfc2Q9D968 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc2Q9D968 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Hcfc2Q9D968 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc2Q9D968 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcfc2Q9D968 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hcfc2Q9D968 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcfc2Q9D968 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcfc2Q9D968 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.45■□□□□ 0.38
Hcfc2Q9D968 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcfc2Q9D968 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcfc2Q9D968 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcfc2Q9D968 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.45■□□□□ 0.38
Hcfc2Q9D968 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcfc2Q9D968 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcfc2Q9D968 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcfc2Q9D968 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcfc2Q9D968 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcfc2Q9D968 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcfc2Q9D968 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hcfc2Q9D968 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcfc2Q9D968 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hcfc2Q9D968 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcfc2Q9D968 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcfc2Q9D968 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcfc2Q9D968 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Hcfc2Q9D968 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms