Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf170Q8CBG9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf170Q8CBG9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf170Q8CBG9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf170Q8CBG9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf170Q8CBG9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf170Q8CBG9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf170Q8CBG9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf170Q8CBG9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf170Q8CBG9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf170Q8CBG9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf170Q8CBG9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf170Q8CBG9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf170Q8CBG9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf170Q8CBG9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf170Q8CBG9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf170Q8CBG9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf170Q8CBG9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf170Q8CBG9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf170Q8CBG9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf170Q8CBG9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Rnf170Q8CBG9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf170Q8CBG9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf170Q8CBG9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.44■□□□□ 0.7
Rnf170Q8CBG9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf170Q8CBG9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rnf170Q8CBG9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf170Q8CBG9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf170Q8CBG9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf170Q8CBG9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf170Q8CBG9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf170Q8CBG9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf170Q8CBG9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf170Q8CBG9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf170Q8CBG9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf170Q8CBG9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rnf170Q8CBG9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf170Q8CBG9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rnf170Q8CBG9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf170Q8CBG9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf170Q8CBG9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf170Q8CBG9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Rnf170Q8CBG9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf170Q8CBG9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Nkain2-201ENSMUST00000092602 558 ntBASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms