Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nipal3Q8BGN5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nipal3Q8BGN5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nipal3Q8BGN5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nipal3Q8BGN5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nipal3Q8BGN5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nipal3Q8BGN5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nipal3Q8BGN5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nipal3Q8BGN5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.8■■□□□ 1.08
Nipal3Q8BGN5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nipal3Q8BGN5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nipal3Q8BGN5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nipal3Q8BGN5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nipal3Q8BGN5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nipal3Q8BGN5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.77■■□□□ 1.08
Nipal3Q8BGN5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nipal3Q8BGN5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nipal3Q8BGN5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nipal3Q8BGN5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nipal3Q8BGN5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nipal3Q8BGN5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nipal3Q8BGN5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nipal3Q8BGN5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nipal3Q8BGN5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nipal3Q8BGN5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nipal3Q8BGN5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nipal3Q8BGN5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nipal3Q8BGN5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nipal3Q8BGN5 Gm7432-201ENSMUST00000210343 879 ntBASIC21.71■■□□□ 1.07
Nipal3Q8BGN5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nipal3Q8BGN5 Particl-201ENSMUST00000205370 1560 ntBASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nipal3Q8BGN5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
Nipal3Q8BGN5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nipal3Q8BGN5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nipal3Q8BGN5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nipal3Q8BGN5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.67■■□□□ 1.06
Nipal3Q8BGN5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nipal3Q8BGN5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nipal3Q8BGN5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nipal3Q8BGN5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nipal3Q8BGN5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nipal3Q8BGN5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nipal3Q8BGN5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nipal3Q8BGN5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Nipal3Q8BGN5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Nipal3Q8BGN5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nipal3Q8BGN5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Nipal3Q8BGN5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nipal3Q8BGN5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.63■■□□□ 1.05
Nipal3Q8BGN5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nipal3Q8BGN5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nipal3Q8BGN5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nipal3Q8BGN5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.62■■□□□ 1.05
Nipal3Q8BGN5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.62■■□□□ 1.05
Nipal3Q8BGN5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.62■■□□□ 1.05
Nipal3Q8BGN5 Gm11599-201ENSMUST00000118720 878 ntBASIC21.61■■□□□ 1.05
Nipal3Q8BGN5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nipal3Q8BGN5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nipal3Q8BGN5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nipal3Q8BGN5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nipal3Q8BGN5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nipal3Q8BGN5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nipal3Q8BGN5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nipal3Q8BGN5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Nipal3Q8BGN5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nipal3Q8BGN5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nipal3Q8BGN5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nipal3Q8BGN5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nipal3Q8BGN5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.57■■□□□ 1.04
Nipal3Q8BGN5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nipal3Q8BGN5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Nipal3Q8BGN5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Nipal3Q8BGN5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nipal3Q8BGN5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.56■■□□□ 1.04
Nipal3Q8BGN5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nipal3Q8BGN5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nipal3Q8BGN5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nipal3Q8BGN5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
Nipal3Q8BGN5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nipal3Q8BGN5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nipal3Q8BGN5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms