Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Samm50Q8BGH2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Samm50Q8BGH2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Samm50Q8BGH2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Samm50Q8BGH2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.08■■□□□ 1.93
Samm50Q8BGH2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Samm50Q8BGH2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Samm50Q8BGH2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
Samm50Q8BGH2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Samm50Q8BGH2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.07■■□□□ 1.92
Samm50Q8BGH2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Samm50Q8BGH2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Samm50Q8BGH2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Samm50Q8BGH2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.05■■□□□ 1.92
Samm50Q8BGH2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Samm50Q8BGH2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Samm50Q8BGH2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Samm50Q8BGH2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Samm50Q8BGH2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Samm50Q8BGH2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Samm50Q8BGH2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Samm50Q8BGH2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Samm50Q8BGH2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Samm50Q8BGH2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Samm50Q8BGH2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Samm50Q8BGH2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.92
Samm50Q8BGH2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Samm50Q8BGH2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Samm50Q8BGH2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Samm50Q8BGH2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27■■□□□ 1.91
Samm50Q8BGH2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27■■□□□ 1.91
Samm50Q8BGH2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27■■□□□ 1.91
Samm50Q8BGH2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Samm50Q8BGH2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Samm50Q8BGH2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Samm50Q8BGH2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Samm50Q8BGH2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Samm50Q8BGH2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Samm50Q8BGH2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
Samm50Q8BGH2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.98■■□□□ 1.91
Samm50Q8BGH2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.98■■□□□ 1.91
Samm50Q8BGH2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.97■■□□□ 1.91
Samm50Q8BGH2 Gm30023-201ENSMUST00000197970 889 ntBASIC26.97■■□□□ 1.91
Samm50Q8BGH2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Samm50Q8BGH2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Samm50Q8BGH2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Samm50Q8BGH2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Samm50Q8BGH2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Samm50Q8BGH2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Samm50Q8BGH2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Samm50Q8BGH2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.93■■□□□ 1.9
Samm50Q8BGH2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Samm50Q8BGH2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.93■■□□□ 1.9
Samm50Q8BGH2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Samm50Q8BGH2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Samm50Q8BGH2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.92■■□□□ 1.9
Samm50Q8BGH2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Samm50Q8BGH2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.91■■□□□ 1.9
Samm50Q8BGH2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Samm50Q8BGH2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Samm50Q8BGH2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Samm50Q8BGH2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Samm50Q8BGH2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Samm50Q8BGH2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Samm50Q8BGH2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Samm50Q8BGH2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Samm50Q8BGH2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Samm50Q8BGH2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Samm50Q8BGH2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.87■■□□□ 1.89
Samm50Q8BGH2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Samm50Q8BGH2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Gm7432-201ENSMUST00000210343 879 ntBASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Samm50Q8BGH2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Samm50Q8BGH2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Samm50Q8BGH2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Samm50Q8BGH2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Samm50Q8BGH2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Samm50Q8BGH2 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.82■■□□□ 1.88
Samm50Q8BGH2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms