Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-2Q5R1I3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-2Q5R1I3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav7-2Q5R1I3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-2Q5R1I3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav7-2Q5R1I3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav7-2Q5R1I3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav7-2Q5R1I3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-2Q5R1I3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-2Q5R1I3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav7-2Q5R1I3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trav7-2Q5R1I3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-2Q5R1I3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Trav7-2Q5R1I3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Nkain2-201ENSMUST00000092602 558 ntBASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav7-2Q5R1I3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-2Q5R1I3 Gm30023-201ENSMUST00000197970 889 ntBASIC17.03■□□□□ 0.32
Trav7-2Q5R1I3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav7-2Q5R1I3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-2Q5R1I3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav7-2Q5R1I3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-2Q5R1I3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-2Q5R1I3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-2Q5R1I3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-2Q5R1I3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-2Q5R1I3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Gm9939-201ENSMUST00000067161 1154 ntBASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7-2Q5R1I3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-2Q5R1I3 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.99■□□□□ 0.31
Trav7-2Q5R1I3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-2Q5R1I3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-2Q5R1I3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-2Q5R1I3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-2Q5R1I3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-2Q5R1I3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-2Q5R1I3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-2Q5R1I3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav7-2Q5R1I3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-2Q5R1I3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-2Q5R1I3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Gm6821-201ENSMUST00000107540 542 ntBASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-2Q5R1I3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7-2Q5R1I3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav7-2Q5R1I3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav7-2Q5R1I3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7-2Q5R1I3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7-2Q5R1I3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav7-2Q5R1I3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-2Q5R1I3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-2Q5R1I3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-2Q5R1I3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7-2Q5R1I3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-2Q5R1I3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-2Q5R1I3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-2Q5R1I3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-2Q5R1I3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav7-2Q5R1I3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms