Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.65■□□□□ 0.74
Cln6Q3U466 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cln6Q3U466 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Cln6Q3U466 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cln6Q3U466 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cln6Q3U466 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.64■□□□□ 0.73
Cln6Q3U466 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cln6Q3U466 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.64■□□□□ 0.73
Cln6Q3U466 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cln6Q3U466 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.64■□□□□ 0.73
Cln6Q3U466 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cln6Q3U466 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cln6Q3U466 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cln6Q3U466 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cln6Q3U466 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cln6Q3U466 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cln6Q3U466 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.62■□□□□ 0.73
Cln6Q3U466 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cln6Q3U466 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cln6Q3U466 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cln6Q3U466 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.61■□□□□ 0.73
Cln6Q3U466 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cln6Q3U466 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cln6Q3U466 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cln6Q3U466 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cln6Q3U466 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cln6Q3U466 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cln6Q3U466 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.58■□□□□ 0.73
Cln6Q3U466 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cln6Q3U466 Gm24970-201ENSMUST00000175582 82 ntBASIC19.58■□□□□ 0.72
Cln6Q3U466 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.58■□□□□ 0.72
Cln6Q3U466 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cln6Q3U466 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cln6Q3U466 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cln6Q3U466 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cln6Q3U466 Gm9397-201ENSMUST00000200125 605 ntBASIC19.57■□□□□ 0.72
Cln6Q3U466 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.57■□□□□ 0.72
Cln6Q3U466 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cln6Q3U466 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cln6Q3U466 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cln6Q3U466 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.56■□□□□ 0.72
Cln6Q3U466 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cln6Q3U466 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cln6Q3U466 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cln6Q3U466 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cln6Q3U466 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cln6Q3U466 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cln6Q3U466 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cln6Q3U466 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cln6Q3U466 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cln6Q3U466 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cln6Q3U466 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cln6Q3U466 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cln6Q3U466 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cln6Q3U466 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cln6Q3U466 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cln6Q3U466 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cln6Q3U466 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.52■□□□□ 0.72
Cln6Q3U466 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cln6Q3U466 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cln6Q3U466 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cln6Q3U466 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cln6Q3U466 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cln6Q3U466 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cln6Q3U466 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cln6Q3U466 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cln6Q3U466 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cln6Q3U466 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cln6Q3U466 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cln6Q3U466 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cln6Q3U466 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cln6Q3U466 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cln6Q3U466 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cln6Q3U466 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cln6Q3U466 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cln6Q3U466 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.48■□□□□ 0.71
Cln6Q3U466 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cln6Q3U466 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.47■□□□□ 0.71
Cln6Q3U466 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln6Q3U466 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cln6Q3U466 Gm45855-201ENSMUST00000212546 880 ntBASIC19.46■□□□□ 0.71
Cln6Q3U466 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cln6Q3U466 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln6Q3U466 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln6Q3U466 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.45■□□□□ 0.7
Cln6Q3U466 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln6Q3U466 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln6Q3U466 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln6Q3U466 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln6Q3U466 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Cln6Q3U466 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
Cln6Q3U466 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.44■□□□□ 0.7
Cln6Q3U466 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms