Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.36■□□□□ 0.69
Gcm1P70348 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gcm1P70348 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gcm1P70348 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gcm1P70348 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gcm1P70348 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gcm1P70348 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gcm1P70348 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Gcm1P70348 Gm37136-201ENSMUST00000194368 194 ntBASIC19.35■□□□□ 0.69
Gcm1P70348 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gcm1P70348 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Gcm1P70348 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gcm1P70348 Gm6311-201ENSMUST00000073790 878 ntBASIC19.34■□□□□ 0.69
Gcm1P70348 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gcm1P70348 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Gcm1P70348 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gcm1P70348 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gcm1P70348 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gcm1P70348 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gcm1P70348 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gcm1P70348 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gcm1P70348 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gcm1P70348 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gcm1P70348 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gcm1P70348 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gcm1P70348 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gcm1P70348 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.3■□□□□ 0.68
Gcm1P70348 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.3■□□□□ 0.68
Gcm1P70348 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Gcm1P70348 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Gcm1P70348 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gcm1P70348 Gm4799-201ENSMUST00000095396 657 ntBASIC19.3■□□□□ 0.68
Gcm1P70348 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Gcm1P70348 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gcm1P70348 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gcm1P70348 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gcm1P70348 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gcm1P70348 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gcm1P70348 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gcm1P70348 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gcm1P70348 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.27■□□□□ 0.68
Gcm1P70348 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gcm1P70348 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gcm1P70348 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gcm1P70348 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gcm1P70348 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gcm1P70348 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.26■□□□□ 0.67
Gcm1P70348 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gcm1P70348 Amer2-203ENSMUST00000225247 2662 ntBASIC19.26■□□□□ 0.67
Gcm1P70348 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gcm1P70348 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gcm1P70348 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.25■□□□□ 0.67
Gcm1P70348 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Gcm1P70348 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gcm1P70348 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gcm1P70348 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gcm1P70348 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.24■□□□□ 0.67
Gcm1P70348 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gcm1P70348 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gcm1P70348 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gcm1P70348 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gcm1P70348 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.23■□□□□ 0.67
Gcm1P70348 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gcm1P70348 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.23■□□□□ 0.67
Gcm1P70348 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gcm1P70348 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gcm1P70348 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gcm1P70348 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gcm1P70348 Mir6538-201ENSMUST00000183713 110 ntBASIC19.22■□□□□ 0.67
Gcm1P70348 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.22■□□□□ 0.67
Gcm1P70348 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gcm1P70348 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gcm1P70348 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gcm1P70348 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gcm1P70348 Mir3960-201ENSMUST00000198213 73 ntBASIC19.2■□□□□ 0.66
Gcm1P70348 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gcm1P70348 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.19■□□□□ 0.66
Gcm1P70348 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gcm1P70348 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gcm1P70348 Gm11175-201ENSMUST00000116172 543 ntBASIC19.18■□□□□ 0.66
Gcm1P70348 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gcm1P70348 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gcm1P70348 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
Gcm1P70348 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.16■□□□□ 0.66
Gcm1P70348 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gcm1P70348 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gcm1P70348 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.15■□□□□ 0.66
Gcm1P70348 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.15■□□□□ 0.66
Gcm1P70348 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.15■□□□□ 0.66
Gcm1P70348 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.15■□□□□ 0.66
Gcm1P70348 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.15■□□□□ 0.66
Gcm1P70348 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gcm1P70348 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gcm1P70348 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gcm1P70348 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms