Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx4P53776 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx4P53776 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx4P53776 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx4P53776 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.47■□□□□ 0.71
Lhx4P53776 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx4P53776 Gm30023-201ENSMUST00000197970 889 ntBASIC19.47■□□□□ 0.71
Lhx4P53776 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.47■□□□□ 0.71
Lhx4P53776 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Lhx4P53776 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Lhx4P53776 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx4P53776 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx4P53776 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx4P53776 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx4P53776 Gm7432-201ENSMUST00000210343 879 ntBASIC19.46■□□□□ 0.71
Lhx4P53776 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx4P53776 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx4P53776 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx4P53776 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx4P53776 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx4P53776 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx4P53776 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx4P53776 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx4P53776 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Lhx4P53776 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.44■□□□□ 0.7
Lhx4P53776 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx4P53776 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx4P53776 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx4P53776 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Lhx4P53776 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx4P53776 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx4P53776 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx4P53776 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx4P53776 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.42■□□□□ 0.7
Lhx4P53776 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.42■□□□□ 0.7
Lhx4P53776 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx4P53776 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.41■□□□□ 0.7
Lhx4P53776 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lhx4P53776 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx4P53776 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx4P53776 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx4P53776 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx4P53776 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.4■□□□□ 0.7
Lhx4P53776 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lhx4P53776 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx4P53776 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Lhx4P53776 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lhx4P53776 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx4P53776 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx4P53776 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx4P53776 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx4P53776 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lhx4P53776 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.38■□□□□ 0.69
Lhx4P53776 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lhx4P53776 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Lhx4P53776 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lhx4P53776 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx4P53776 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx4P53776 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx4P53776 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx4P53776 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx4P53776 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx4P53776 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx4P53776 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx4P53776 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.36■□□□□ 0.69
Lhx4P53776 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx4P53776 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx4P53776 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx4P53776 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx4P53776 Gm11599-201ENSMUST00000118720 878 ntBASIC19.35■□□□□ 0.69
Lhx4P53776 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.35■□□□□ 0.69
Lhx4P53776 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx4P53776 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx4P53776 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx4P53776 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
Lhx4P53776 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx4P53776 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx4P53776 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx4P53776 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx4P53776 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx4P53776 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx4P53776 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx4P53776 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx4P53776 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx4P53776 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx4P53776 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx4P53776 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx4P53776 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx4P53776 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.29■□□□□ 0.68
Lhx4P53776 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx4P53776 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx4P53776 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lhx4P53776 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.28■□□□□ 0.68
Lhx4P53776 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx4P53776 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx4P53776 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx4P53776 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx4P53776 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.27■□□□□ 0.68
Lhx4P53776 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.27■□□□□ 0.67
Lhx4P53776 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms