Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 NAF1YNL124W 1479 nt9.36□□□□□ -0.91
RPN11P43588 OSM1YJR051W 1506 nt9.36□□□□□ -0.91
RPN11P43588 YLR162WYLR162W 357 nt9.35□□□□□ -0.91
RPN11P43588 RCF1YML030W 480 nt9.35□□□□□ -0.91
RPN11P43588 SPT20YOL148C 1815 nt9.35□□□□□ -0.91
RPN11P43588 MRS4YKR052C 915 nt9.34□□□□□ -0.91
RPN11P43588 YNL295WYNL295W 1575 nt9.33□□□□□ -0.92
RPN11P43588 CPR2YHR057C 618 nt9.33□□□□□ -0.92
RPN11P43588 PRY2YKR013W 990 nt9.33□□□□□ -0.92
RPN11P43588 NFS1YCL017C 1494 nt9.33□□□□□ -0.92
RPN11P43588 PAB1YER165W 1734 nt9.32□□□□□ -0.92
RPN11P43588 YDR467CYDR467C 327 nt9.32□□□□□ -0.92
RPN11P43588 DPM1YPR183W 804 nt9.31□□□□□ -0.92
RPN11P43588 HOL1YNR055C 1761 nt9.3□□□□□ -0.92
RPN11P43588 PIL1YGR086C 1020 nt9.3□□□□□ -0.92
RPN11P43588 GPD2YOL059W 1323 nt9.3□□□□□ -0.92
RPN11P43588 SPS1YDR523C 1473 nt9.29□□□□□ -0.92
RPN11P43588 HOC1YJR075W 1191 nt9.29□□□□□ -0.92
RPN11P43588 YML122CYML122C 381 nt9.29□□□□□ -0.92
RPN11P43588 YMC2YBR104W 990 nt9.29□□□□□ -0.92
RPN11P43588 DML1YMR211W 1428 nt9.29□□□□□ -0.92
RPN11P43588 LEU4YNL104C 1860 nt9.28□□□□□ -0.92
RPN11P43588 GPD1YDL022W 1176 nt9.28□□□□□ -0.92
RPN11P43588 LIA1YJR070C 978 nt9.28□□□□□ -0.92
RPN11P43588 YOL046CYOL046C 675 nt9.28□□□□□ -0.92
RPN11P43588 OPI1YHL020C 1215 nt9.27□□□□□ -0.93
RPN11P43588 INP54YOL065C 1155 nt9.27□□□□□ -0.93
RPN11P43588 TPN1YGL186C 1740 nt9.27□□□□□ -0.93
RPN11P43588 DST1YGL043W 930 nt9.26□□□□□ -0.93
RPN11P43588 YKL147CYKL147C 618 nt9.26□□□□□ -0.93
RPN11P43588 tE(CUC)DtE(CUC)D 72 nt9.25□□□□□ -0.93
RPN11P43588 tE(CUC)ItE(CUC)I 72 nt9.25□□□□□ -0.93
RPN11P43588 MRPL19YNL185C 477 nt9.25□□□□□ -0.93
RPN11P43588 MRPL35YDR322W 1104 nt9.24□□□□□ -0.93
RPN11P43588 IRC7YFR055W 1023 nt9.24□□□□□ -0.93
RPN11P43588 YIL029W-AYIL029W-A 372 nt9.24□□□□□ -0.93
RPN11P43588 YML034C-AYML034C-A 399 nt9.24□□□□□ -0.93
RPN11P43588 MED6YHR058C 888 nt9.23□□□□□ -0.93
RPN11P43588 YHR218W-AYHR218W-A 318 nt9.23□□□□□ -0.93
RPN11P43588 DRE2YKR071C 1047 nt9.23□□□□□ -0.93
RPN11P43588 YBL112CYBL112C 318 nt9.23□□□□□ -0.93
RPN11P43588 AGX1YFL030W 1158 nt9.22□□□□□ -0.93
RPN11P43588 MNN9YPL050C 1188 nt9.22□□□□□ -0.93
RPN11P43588 SSC1YJR045C 1965 nt9.22□□□□□ -0.93
RPN11P43588 RBS1YDL189W 1374 nt9.22□□□□□ -0.93
RPN11P43588 COX15YER141W 1461 nt9.21□□□□□ -0.93
RPN11P43588 YOR200WYOR200W 399 nt9.21□□□□□ -0.94
RPN11P43588 DIP5YPL265W 1827 nt9.21□□□□□ -0.94
RPN11P43588 UGP1YKL035W 1500 nt9.21□□□□□ -0.94
RPN11P43588 SKP1YDR328C 585 nt9.19□□□□□ -0.94
RPN11P43588 DSC3YOR223W 879 nt9.19□□□□□ -0.94
RPN11P43588 ODC1YPL134C 933 nt9.19□□□□□ -0.94
RPN11P43588 YCL049CYCL049C 939 nt9.19□□□□□ -0.94
RPN11P43588 WSC3YOL105C 1671 nt9.19□□□□□ -0.94
RPN11P43588 IMG1YCR046C 510 nt9.18□□□□□ -0.94
RPN11P43588 YPT10YBR264C 600 nt9.18□□□□□ -0.94
RPN11P43588 YJL163CYJL163C 1668 nt9.17□□□□□ -0.94
RPN11P43588 DMA2YNL116W 1569 nt9.17□□□□□ -0.94
RPN11P43588 snR86snR86 1004 nt9.17□□□□□ -0.94
RPN11P43588 PPZ2YDR436W 2133 nt9.16□□□□□ -0.94
RPN11P43588 MET13YGL125W 1803 nt9.15□□□□□ -0.94
RPN11P43588 YGR137WYGR137W 375 nt9.15□□□□□ -0.94
RPN11P43588 YPR130CYPR130C 408 nt9.15□□□□□ -0.94
RPN11P43588 ILV6YCL009C 930 nt9.15□□□□□ -0.94
RPN11P43588 YEL075W-AYEL075W-A 612 nt9.14□□□□□ -0.95
RPN11P43588 YLR463CYLR463C 552 nt9.14□□□□□ -0.95
RPN11P43588 YNR001W-AYNR001W-A 219 nt9.14□□□□□ -0.95
RPN11P43588 SNP1YIL061C 903 nt9.13□□□□□ -0.95
RPN11P43588 PAM17YKR065C 594 nt9.13□□□□□ -0.95
RPN11P43588 ERR3YMR323W 1314 nt9.12□□□□□ -0.95
RPN11P43588 ALG7YBR243C 1347 nt9.12□□□□□ -0.95
RPN11P43588 YPQ2YDR352W 954 nt9.12□□□□□ -0.95
RPN11P43588 YPR076WYPR076W 375 nt9.12□□□□□ -0.95
RPN11P43588 HIS2YFR025C 1008 nt9.11□□□□□ -0.95
RPN11P43588 FIT1YDR534C 1587 nt9.11□□□□□ -0.95
RPN11P43588 BUD31YCR063W 474 nt9.1□□□□□ -0.95
RPN11P43588 MDM35YKL053C-A 261 nt9.1□□□□□ -0.95
RPN11P43588 YMR252CYMR252C 405 nt9.1□□□□□ -0.95
RPN11P43588 GET2YER083C 858 nt9.08□□□□□ -0.96
RPN11P43588 AAT1YKL106W 1356 nt9.08□□□□□ -0.96
RPN11P43588 FMP40YPL222W 2067 nt9.08□□□□□ -0.96
RPN11P43588 INO1YJL153C 1602 nt9.07□□□□□ -0.96
RPN11P43588 PPH21YDL134C 1110 nt9.07□□□□□ -0.96
RPN11P43588 LCL3YGL085W 825 nt9.07□□□□□ -0.96
RPN11P43588 CMP2YML057W 1815 nt9.06□□□□□ -0.96
RPN11P43588 CIA1YDR267C 993 nt9.06□□□□□ -0.96
RPN11P43588 FIT2YOR382W 462 nt9.06□□□□□ -0.96
RPN11P43588 TUB1YML085C 1344 nt9.05□□□□□ -0.96
RPN11P43588 NPP2YEL016C 1482 nt9.05□□□□□ -0.96
RPN11P43588 RPL2AYFR031C-A 765 nt9.05□□□□□ -0.96
RPN11P43588 RPL2BYIL018W 765 nt9.05□□□□□ -0.96
RPN11P43588 HSL7YBR133C 2484 nt9.04□□□□□ -0.96
RPN11P43588 NDE2YDL085W 1638 nt9.04□□□□□ -0.96
RPN11P43588 SAL1YNL083W 1485 nt9.03□□□□□ -0.96
RPN11P43588 INH1YDL181W 258 nt9.03□□□□□ -0.96
RPN11P43588 TDA4YJR116W 840 nt9.03□□□□□ -0.96
RPN11P43588 GET4YOR164C 939 nt9.03□□□□□ -0.96
RPN11P43588 YDL144CYDL144C 1071 nt9.02□□□□□ -0.97
RPN11P43588 CRH1YGR189C 1524 nt9.01□□□□□ -0.97
RPN11P43588 YJL213WYJL213W 996 nt9.01□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms