Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 tD(GUC)MtD(GUC)M 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)OtD(GUC)O 72 nt8.69□□□□□ -1.02
VPS35P34110 MRP1YDR347W 966 nt8.69□□□□□ -1.02
VPS35P34110 PIC2YER053C 903 nt8.69□□□□□ -1.02
VPS35P34110 UFD1YGR048W 1086 nt8.69□□□□□ -1.02
VPS35P34110 YJL009WYJL009W 327 nt8.69□□□□□ -1.02
VPS35P34110 YMR206WYMR206W 942 nt8.68□□□□□ -1.02
VPS35P34110 THI6YPL214C 1623 nt8.68□□□□□ -1.02
VPS35P34110 ICE2YIL090W 1476 nt8.67□□□□□ -1.02
VPS35P34110 HXT11YOL156W 1704 nt8.67□□□□□ -1.02
VPS35P34110 NAT5YOR253W 531 nt8.67□□□□□ -1.02
VPS35P34110 FRA1YLL029W 2250 nt8.66□□□□□ -1.02
VPS35P34110 AAT1YKL106W 1356 nt8.66□□□□□ -1.02
VPS35P34110 PET18YCR020C 648 nt8.66□□□□□ -1.02
VPS35P34110 YER156CYER156C 1017 nt8.65□□□□□ -1.02
VPS35P34110 YGL118CYGL118C 438 nt8.65□□□□□ -1.02
VPS35P34110 YHR145CYHR145C 357 nt8.65□□□□□ -1.02
VPS35P34110 YBL081WYBL081W 1107 nt8.65□□□□□ -1.02
VPS35P34110 SRM1YGL097W 1449 nt8.64□□□□□ -1.03
VPS35P34110 GDH1YOR375C 1365 nt8.64□□□□□ -1.03
VPS35P34110 YAL016C-AYAL016C-A 315 nt8.64□□□□□ -1.03
VPS35P34110 MRS3YJL133W 945 nt8.64□□□□□ -1.03
VPS35P34110 RPL12BYDR418W 498 nt8.63□□□□□ -1.03
VPS35P34110 RNA170RNA170 169 nt8.63□□□□□ -1.03
VPS35P34110 YKR023WYKR023W 1593 nt8.63□□□□□ -1.03
VPS35P34110 RHO1YPR165W 630 nt8.62□□□□□ -1.03
VPS35P34110 FIT1YDR534C 1587 nt8.61□□□□□ -1.03
VPS35P34110 ADA2YDR448W 1305 nt8.61□□□□□ -1.03
VPS35P34110 YLR072WYLR072W 2082 nt8.6□□□□□ -1.03
VPS35P34110 BXI1YNL305C 894 nt8.6□□□□□ -1.03
VPS35P34110 MIM1YOL026C 342 nt8.6□□□□□ -1.03
VPS35P34110 RPS6AYPL090C 711 nt8.6□□□□□ -1.03
VPS35P34110 RPS6BYBR181C 711 nt8.6□□□□□ -1.03
VPS35P34110 GET2YER083C 858 nt8.59□□□□□ -1.03
VPS35P34110 TAD2YJL035C 753 nt8.59□□□□□ -1.03
VPS35P34110 THI73YLR004C 1572 nt8.58□□□□□ -1.04
VPS35P34110 UTR5YEL035C 501 nt8.58□□□□□ -1.04
VPS35P34110 AIM41YOR215C 558 nt8.58□□□□□ -1.04
VPS35P34110 YPR150WYPR150W 522 nt8.58□□□□□ -1.04
VPS35P34110 ALG7YBR243C 1347 nt8.57□□□□□ -1.04
VPS35P34110 HBS1YKR084C 1836 nt8.57□□□□□ -1.04
VPS35P34110 CWC25YNL245C 540 nt8.57□□□□□ -1.04
VPS35P34110 YBR056WYBR056W 1506 nt8.57□□□□□ -1.04
VPS35P34110 TDH1YJL052W 999 nt8.56□□□□□ -1.04
VPS35P34110 YHR131CYHR131C 2553 nt8.56□□□□□ -1.04
VPS35P34110 DUR3YHL016C 2208 nt8.56□□□□□ -1.04
VPS35P34110 PUP3YER094C 618 nt8.55□□□□□ -1.04
VPS35P34110 COS6YGR295C 1146 nt8.55□□□□□ -1.04
VPS35P34110 PMU1YKL128C 888 nt8.55□□□□□ -1.04
VPS35P34110 ATP2YJR121W 1536 nt8.54□□□□□ -1.04
VPS35P34110 snR78snR78 87 nt8.54□□□□□ -1.04
VPS35P34110 snR86snR86 1004 nt8.54□□□□□ -1.04
VPS35P34110 MOD5YOR274W 1287 nt8.54□□□□□ -1.04
VPS35P34110 COA2YPL189C-A 207 nt8.54□□□□□ -1.04
VPS35P34110 ELP4YPL101W 1371 nt8.53□□□□□ -1.04
VPS35P34110 BUD31YCR063W 474 nt8.53□□□□□ -1.04
VPS35P34110 RRP1YDR087C 837 nt8.53□□□□□ -1.04
VPS35P34110 MMS21YEL019C 804 nt8.53□□□□□ -1.04
VPS35P34110 PRE10YOR362C 867 nt8.52□□□□□ -1.05
VPS35P34110 PET20YPL159C 762 nt8.52□□□□□ -1.05
VPS35P34110 YHP1YDR451C 1062 nt8.51□□□□□ -1.05
VPS35P34110 PCL10YGL134W 1302 nt8.51□□□□□ -1.05
VPS35P34110 MEP1YGR121C 1479 nt8.51□□□□□ -1.05
VPS35P34110 ABP1YCR088W 1779 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)B1tL(UAA)B1 84 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)B2tL(UAA)B2 84 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)DtL(UAA)D 84 nt8.5□□□□□ -1.05
VPS35P34110 SUP51tL(UAA)J 84 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)KtL(UAA)K 84 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)LtL(UAA)L 84 nt8.5□□□□□ -1.05
VPS35P34110 tL(UAA)NtL(UAA)N 84 nt8.5□□□□□ -1.05
VPS35P34110 PRE2YPR103W 864 nt8.5□□□□□ -1.05
VPS35P34110 YGR137WYGR137W 375 nt8.49□□□□□ -1.05
VPS35P34110 YHL030W-AYHL030W-A 462 nt8.49□□□□□ -1.05
VPS35P34110 ORT1YOR130C 879 nt8.49□□□□□ -1.05
VPS35P34110 BNA3YJL060W 1335 nt8.49□□□□□ -1.05
VPS35P34110 RCF1YML030W 480 nt8.48□□□□□ -1.05
VPS35P34110 LEA1YPL213W 717 nt8.48□□□□□ -1.05
VPS35P34110 EHT1YBR177C 1356 nt8.48□□□□□ -1.05
VPS35P34110 TIM50YPL063W 1431 nt8.47□□□□□ -1.05
VPS35P34110 YEL074WYEL074W 339 nt8.47□□□□□ -1.05
VPS35P34110 URE2YNL229C 1065 nt8.47□□□□□ -1.05
VPS35P34110 TOS1YBR162C 1368 nt8.47□□□□□ -1.05
VPS35P34110 YIL168WYIL168W 384 nt8.46□□□□□ -1.06
VPS35P34110 ADE1YAR015W 921 nt8.46□□□□□ -1.06
VPS35P34110 snR4snR4 186 nt8.46□□□□□ -1.06
VPS35P34110 NDE2YDL085W 1638 nt8.46□□□□□ -1.06
VPS35P34110 NUP53YMR153W 1428 nt8.46□□□□□ -1.06
VPS35P34110 ORM1YGR038W 669 nt8.45□□□□□ -1.06
VPS35P34110 YOR268CYOR268C 399 nt8.45□□□□□ -1.06
VPS35P34110 SHC1YER096W 1539 nt8.44□□□□□ -1.06
VPS35P34110 YJL043WYJL043W 774 nt8.44□□□□□ -1.06
VPS35P34110 YNL190WYNL190W 615 nt8.44□□□□□ -1.06
VPS35P34110 SNU71YGR013W 1863 nt8.44□□□□□ -1.06
VPS35P34110 DUS3YLR401C 2007 nt8.44□□□□□ -1.06
VPS35P34110 JHD1YER051W 1479 nt8.44□□□□□ -1.06
VPS35P34110 GAT1YFL021W 1533 nt8.44□□□□□ -1.06
VPS35P34110 MET30YIL046W 1923 nt8.43□□□□□ -1.06
VPS35P34110 LRO1YNR008W 1986 nt8.43□□□□□ -1.06
VPS35P34110 TAF4YMR005W 1167 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 97.4 ms