Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
Pcdh12O55134 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh12O55134 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh12O55134 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh12O55134 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdh12O55134 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcdh12O55134 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh12O55134 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdh12O55134 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh12O55134 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh12O55134 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh12O55134 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh12O55134 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh12O55134 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh12O55134 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh12O55134 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdh12O55134 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
Pcdh12O55134 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh12O55134 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdh12O55134 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdh12O55134 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh12O55134 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh12O55134 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.91■□□□□ 0.94
Pcdh12O55134 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh12O55134 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh12O55134 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh12O55134 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh12O55134 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Pcdh12O55134 Gm11599-201ENSMUST00000118720 878 ntBASIC20.9■□□□□ 0.94
Pcdh12O55134 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh12O55134 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh12O55134 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh12O55134 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Pcdh12O55134 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh12O55134 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh12O55134 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdh12O55134 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pcdh12O55134 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh12O55134 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.88■□□□□ 0.93
Pcdh12O55134 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh12O55134 Particl-201ENSMUST00000205370 1560 ntBASIC20.88■□□□□ 0.93
Pcdh12O55134 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh12O55134 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh12O55134 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh12O55134 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh12O55134 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh12O55134 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh12O55134 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdh12O55134 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.86■□□□□ 0.93
Pcdh12O55134 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh12O55134 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh12O55134 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh12O55134 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdh12O55134 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh12O55134 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh12O55134 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh12O55134 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh12O55134 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh12O55134 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh12O55134 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh12O55134 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh12O55134 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh12O55134 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh12O55134 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh12O55134 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh12O55134 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdh12O55134 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.82■□□□□ 0.92
Pcdh12O55134 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh12O55134 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh12O55134 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh12O55134 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh12O55134 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh12O55134 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh12O55134 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh12O55134 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh12O55134 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh12O55134 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh12O55134 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh12O55134 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh12O55134 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh12O55134 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh12O55134 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh12O55134 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh12O55134 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh12O55134 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdh12O55134 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdh12O55134 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh12O55134 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh12O55134 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh12O55134 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh12O55134 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdh12O55134 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh12O55134 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh12O55134 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh12O55134 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh12O55134 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh12O55134 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh12O55134 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh12O55134 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdh12O55134 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 454.5 ms