Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.21□□□□□ -1.9
SATB2Q9UPW6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.21□□□□□ -1.9
SATB2Q9UPW6 AL590099.1-201ENST00000615276 138 ntBASIC3.21□□□□□ -1.9
SATB2Q9UPW6 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.21□□□□□ -1.9
SATB2Q9UPW6 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
SATB2Q9UPW6 AC004972.1-201ENST00000623934 2209 ntBASIC3.21□□□□□ -1.9
SATB2Q9UPW6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SATB2Q9UPW6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SATB2Q9UPW6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL049545.1-201ENST00000401856 572 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL356421.1-201ENST00000403255 413 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 RNU4-65P-201ENST00000410473 140 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 SSXP9-201ENST00000417503 292 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 RPL23AP82-202ENST00000427528 469 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 RSU1P2-202ENST00000437884 485 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 OR6K5P-201ENST00000447050 945 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 RNU7-125P-201ENST00000458760 62 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AC072039.1-201ENST00000477611 581 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 MTND5P4-201ENST00000514978 288 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AC004223.4-201ENST00000612426 332 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AL360181.4-201ENST00000621752 134 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AP000676.3-201ENST00000623299 569 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 LRRC77P-213ENST00000637727 880 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AC092447.10-201ENST00000620607 1652 ntBASIC3.2□□□□□ -1.9
SATB2Q9UPW6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SATB2Q9UPW6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL672167.1-206ENST00000356293 943 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 SNORA80A-201ENST00000363922 136 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 RNU6-359P-201ENST00000365466 108 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 RPS15AP38-201ENST00000413110 372 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 BEND7P1-201ENST00000422058 457 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 MTND4P20-201ENST00000424125 869 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 BX119904.4-201ENST00000424402 301 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC008264.1-201ENST00000447612 367 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AP000542.1-201ENST00000448473 371 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AP001025.2-201ENST00000490908 477 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC080014.1-201ENST00000496877 1201 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC010486.2-201ENST00000505572 483 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 KLHL2P1-201ENST00000508691 521 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 OR4K8P-201ENST00000578842 1048 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC090616.2-202ENST00000584248 222 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC067852.3-201ENST00000589177 561 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC097468.3-201ENST00000607956 456 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AL390240.1-201ENST00000612950 384 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC079248.2-201ENST00000623779 326 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 AC099063.3-201ENST00000642066 185 ntBASIC3.19□□□□□ -1.9
SATB2Q9UPW6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SATB2Q9UPW6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 MTND4P16-201ENST00000466108 1367 ntBASIC3.18□□□□□ -1.9
SATB2Q9UPW6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 FRG1BP-201ENST00000278882 761 ntBASIC3.18□□□□□ -1.9
SATB2Q9UPW6 RNU6-97P-201ENST00000363387 104 ntBASIC3.18□□□□□ -1.9
SATB2Q9UPW6 RNU6-660P-201ENST00000364566 109 ntBASIC3.18□□□□□ -1.9
SATB2Q9UPW6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.18□□□□□ -1.9
SATB2Q9UPW6 RNU5A-2P-201ENST00000384337 116 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms