Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC008834.1-201ENST00000511612 175 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 SNORA31.8-201ENST00000516327 108 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AC090888.1-201ENST00000561335 1141 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AC107954.1-201ENST00000565906 727 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 PRR13P7-201ENST00000605538 430 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AC007038.2-201ENST00000608095 740 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AC015726.3-201ENST00000624501 418 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 MIR7515-201ENST00000637837 67 ntBASIC1.12□□□□□ -2.23
SMCO4Q9NRQ5 MTND4P23-201ENST00000447723 1363 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 Z98749.2-208ENST00000381646 500 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 RNU6-198P-201ENST00000384258 104 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 RNU6-532P-201ENST00000384318 107 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 MTCYBP7-201ENST00000419540 1134 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 GTF2IP7-202ENST00000436677 309 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 RPL21P134-201ENST00000453468 483 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 BX248409.1-201ENST00000455497 255 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 snoU13.3-201ENST00000459441 104 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC107032.1-201ENST00000485945 480 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AP005205.1-201ENST00000563503 508 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 MIR3609-201ENST00000582661 80 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC090312.2-201ENST00000582687 378 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 BX248123.2-201ENST00000606318 124 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 MIR502-201ENST00000606349 86 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC012557.1-201ENST00000607115 611 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AL592494.3-201ENST00000609485 464 ntBASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.11□□□□□ -2.23
SMCO4Q9NRQ5 AC046144.1-201ENST00000478559 1853 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 RNU6-1159P-201ENST00000362933 107 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 MTCO3P12-201ENST00000416718 547 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 RPL7L1P10-201ENST00000427790 463 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC090774.1-201ENST00000435925 246 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AL353705.4-201ENST00000449661 238 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AL359385.1-201ENST00000456509 365 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC096992.1-201ENST00000459808 709 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 RPS15AP36-201ENST00000492022 382 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC092436.1-201ENST00000506450 503 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC016550.3-201ENST00000515706 767 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 MIR4444-1-201ENST00000581696 74 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 MIR4444-2-201ENST00000584390 74 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC079089.3-201ENST00000603094 673 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AC055764.2-201ENST00000610089 670 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AL773524.1-201ENST00000614065 229 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 AL136360.1-201ENST00000503377 1900 ntBASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SMCO4Q9NRQ5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 SNORA51.12-201ENST00000384448 134 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 HMGB3P31-201ENST00000413333 595 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 AC016769.2-201ENST00000414815 475 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 RPL30P13-201ENST00000418873 348 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 HMGN2P3-201ENST00000433603 273 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 HMGN2P5-201ENST00000436882 273 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 ARPC3P1-201ENST00000437218 533 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 OR5H5P-201ENST00000503164 928 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 AC112518.2-201ENST00000508565 425 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 MTND4LP24-201ENST00000572277 291 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 RN7SL371P-201ENST00000578099 267 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 MIR4429-201ENST00000580105 73 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 RPAP2P1-201ENST00000603626 1168 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 AC025588.2-201ENST00000604851 466 ntBASIC1.09□□□□□ -2.23
SMCO4Q9NRQ5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms