Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 SNORD115-32-201ENST00000364079 82 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RNU6-1325P-201ENST00000364905 105 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 SNORA40-201ENST00000388090 126 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 SNORA40.19-201ENST00000390846 128 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AL022722.2-201ENST00000402519 180 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RNU6-1025P-201ENST00000410629 104 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AL513331.1-201ENST00000411908 397 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AL158156.1-201ENST00000422509 473 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RN7SKP288-201ENST00000516227 268 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RNA5SP438-201ENST00000516561 112 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RMST_6.1-201ENST00000611980 203 ntBASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
PRDM9Q9NQV7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PRDM9Q9NQV7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRDM9Q9NQV7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRDM9Q9NQV7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRDM9Q9NQV7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
PRDM9Q9NQV7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AL137141.1-201ENST00000624622 4836 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 DNM1P47-203ENST00000571780 12667 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RNU6-653P-201ENST00000363074 106 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 Y_RNA.217-201ENST00000364214 105 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 Y_RNA.230-201ENST00000364348 109 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SNORD116-14-201ENST00000383894 92 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SNORD116-17-201ENST00000383929 92 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SNORD116-15-201ENST00000384445 92 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RNU6-843P-201ENST00000384454 104 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SNORD116-20-201ENST00000384529 92 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SNORD116-19-201ENST00000384729 92 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RPL11P3-201ENST00000395256 523 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RNU2-50P-201ENST00000410494 143 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AC008065.1-201ENST00000428525 348 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AL663074.2-201ENST00000440621 479 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 Y_RNA.641-201ENST00000459414 105 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RN7SL799P-201ENST00000475891 298 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RPL26P26-201ENST00000480251 434 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RPL21P13-201ENST00000488305 481 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 TGIF1P1-201ENST00000558095 802 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AC008749.1-201ENST00000597650 306 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 RPL23AP88-201ENST00000605759 454 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AL161756.3-201ENST00000641216 2071 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 AC010332.2-201ENST00000613083 1904 ntBASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.58□□□□□ -1.52
PRDM9Q9NQV7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 LINC01109-201ENST00000603837 3081 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 RNU6-879P-201ENST00000364328 108 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 Y_RNA.357-201ENST00000365487 109 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 SNORD12B-201ENST00000410433 91 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 CYCSP10-201ENST00000417973 294 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 POLR2KP2-201ENST00000438155 177 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 SNORA40.9-201ENST00000515895 93 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 RNU6-1114P-201ENST00000516022 107 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 RNU6-1333P-201ENST00000516162 93 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 RNA5SP271-201ENST00000516700 88 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms