Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC092324.1-201ENST00000468671 324 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 RN7SL97P-201ENST00000486780 299 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC105758.1-201ENST00000506038 399 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 MTND1P19-201ENST00000511780 315 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 RN7SKP260-201ENST00000516907 149 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC134698.5-201ENST00000519444 336 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 OR10G5P-201ENST00000532733 358 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC209154.1-201ENST00000582156 337 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC005899.2-201ENST00000584353 90 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL355812.1-201ENST00000603215 216 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC104763.2-201ENST00000604179 382 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 RNA5SP440-201ENST00000612665 119 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AL450472.3-201ENST00000615578 367 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC019206.1-201ENST00000621938 425 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 MAPK10-303ENST00000641324 3959 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.83□□□□□ -1.64
SSU72Q9NP77 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSU72Q9NP77 AC092435.4-201ENST00000623012 4159 ntBASIC4.83□□□□□ -1.64
SSU72Q9NP77 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 RNU6-190P-201ENST00000384154 102 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 MT-TW-201ENST00000387382 68 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC009804.1-201ENST00000400949 179 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL357515.1-201ENST00000402967 542 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 HDGFP1-201ENST00000405943 252 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC090774.1-201ENST00000435925 246 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 OSTCP8-201ENST00000445117 448 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RPL9P32-201ENST00000464118 620 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC009127.1-201ENST00000467090 155 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RPS23P3-201ENST00000470993 430 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RN7SL466P-201ENST00000497546 295 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 RNU2-53P-201ENST00000516257 147 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RN7SKP70-201ENST00000516655 271 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RNU6-352P-201ENST00000516908 107 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC015912.2-201ENST00000571053 181 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC125232.2-201ENST00000592457 143 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL512605.2-201ENST00000592972 256 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RPL7P50-201ENST00000600588 727 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 AL161616.1-201ENST00000611867 286 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 EIF3FP1-201ENST00000613970 806 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 MIR4272-201ENST00000635924 64 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AP000542.2-201ENST00000623199 6179 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 MAPK10-349ENST00000641767 3661 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.82□□□□□ -1.64
SSU72Q9NP77 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 AC233263.6-201ENST00000631132 1963 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 PABPC1P7-201ENST00000413177 1513 ntBASIC4.82□□□□□ -1.64
SSU72Q9NP77 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSU72Q9NP77 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSU72Q9NP77 Y_RNA.39-201ENST00000362620 98 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RNU6-263P-201ENST00000363811 107 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RNU6-1329P-201ENST00000365664 107 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 Y_RNA.424-201ENST00000384063 103 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 MIR517A-201ENST00000385001 87 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AL590704.1-201ENST00000402856 794 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 RPS3P2-201ENST00000421346 701 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RPL12P34-201ENST00000424532 479 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 UBE2V1P4-201ENST00000425374 344 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RPL23AP50-201ENST00000434149 455 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RPL36AP39-201ENST00000445859 318 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.81□□□□□ -1.64
SSU72Q9NP77 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC097484.1-201ENST00000471148 389 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC108022.1-201ENST00000493466 478 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 RN7SL649P-201ENST00000496974 275 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC114801.2-201ENST00000503825 781 ntBASIC4.81□□□□□ -1.64
SSU72Q9NP77 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms