Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 CDH12P3-201ENST00000517935 295 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 CDH12P1-201ENST00000518435 295 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC025281.1-201ENST00000567026 265 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AL356280.1-201ENST00000603614 379 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC080013.4-201ENST00000607624 649 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 OR10AB1P-201ENST00000609613 938 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC026422.1-201ENST00000623961 452 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RNU6-216P-201ENST00000363282 104 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RNU5E-8P-201ENST00000363502 116 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RNA5SP456-201ENST00000364002 114 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RN7SKP226-201ENST00000364912 300 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RN7SKP27-201ENST00000410684 333 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC091390.3-201ENST00000426478 338 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 MRPS17P3-201ENST00000465453 385 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 MTCO2P9-201ENST00000503214 694 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC026801.2-201ENST00000515352 425 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC022861.1-201ENST00000522981 663 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 HSPA8P13-201ENST00000523715 472 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 OR8K2P-201ENST00000524645 927 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC005951.2-201ENST00000576282 495 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 MIR5004-201ENST00000579078 107 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AL390208.1-201ENST00000605885 644 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC024941.1-201ENST00000612250 334 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AL603758.1-201ENST00000618654 241 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC253576.2-201ENST00000618815 580 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AC068057.2-201ENST00000624047 895 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 CU459211.1-201ENST00000635667 749 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 Z99496.1-201ENST00000469424 1477 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 AL359851.1-201ENST00000569460 4997 ntBASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VCX3AQ9NNX9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AL139421.1-201ENST00000423010 169 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 DPRXP1-201ENST00000426312 460 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC008850.1-201ENST00000427546 362 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC018644.1-201ENST00000429934 551 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 Z82210.1-201ENST00000440037 231 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 PIGFP3-201ENST00000441918 722 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 CBWD4P-201ENST00000445695 655 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 COX6CP12-201ENST00000446748 202 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC006445.1-201ENST00000491925 405 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC114786.4-201ENST00000508771 728 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC114797.1-201ENST00000514003 728 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 RNA5SP364-201ENST00000516938 78 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC022634.1-201ENST00000520765 532 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 CYB5AP5-201ENST00000549779 389 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 VN1R85P-201ENST00000601587 426 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AL445435.1-201ENST00000604232 665 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 MTND4LP5-201ENST00000605152 292 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AL158211.4-201ENST00000606988 584 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AL118556.2-201ENST00000614375 824 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 AC120349.2-201ENST00000625002 298 ntBASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.23□□□□□ -2.05
VCX3AQ9NNX9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 SNORD62.1-201ENST00000362541 86 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AL109755.1-201ENST00000401791 649 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RN7SKP202-201ENST00000410439 330 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RN7SKP263-201ENST00000411194 309 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AL513331.1-201ENST00000411908 397 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC023141.4-201ENST00000412031 328 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RSL24D1P6-201ENST00000426934 401 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms