Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 MIR548AB-201ENST00000584917 84 ntBASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 AL022161.1-201ENST00000604390 213 ntBASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 AL356473.1-201ENST00000406203 1408 ntBASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FAM49AQ9H0Q0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL445523.1-201ENST00000451184 1362 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RPL7P26-201ENST00000333817 754 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RNU4-21P-201ENST00000362802 126 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 SNORA7.2-201ENST00000364446 145 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RNU6-769P-201ENST00000384407 104 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 MIR607-201ENST00000385241 96 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RPL23AP39-201ENST00000415533 405 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AIMP1P1-201ENST00000418670 937 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL390023.1-201ENST00000428836 262 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL365184.2-201ENST00000431139 435 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RPL36AP33-201ENST00000450395 310 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL049830.2-201ENST00000480072 201 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AP001086.1-201ENST00000494882 321 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC024589.1-201ENST00000512207 263 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC106038.2-201ENST00000520706 568 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AP004247.1-201ENST00000531556 1289 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AP001981.2-201ENST00000603241 418 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AP000403.1-201ENST00000603349 851 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AC004987.4-201ENST00000603383 338 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 AL596245.1-201ENST00000618994 362 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FAM49AQ9H0Q0 USP8P1-201ENST00000494673 3183 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AL513185.3-201ENST00000433335 1300 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RNU6-1207P-201ENST00000384343 107 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RPS15AP38-201ENST00000413110 372 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 SNRPEP7-201ENST00000438350 220 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AL135938.1-201ENST00000443141 297 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 TAF9P1-201ENST00000445421 515 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RPL37P4-201ENST00000448908 268 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 TAF9P2-201ENST00000454958 515 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 OR6K1P-201ENST00000456766 971 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RPL31P13-201ENST00000484151 370 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC010625.1-201ENST00000511296 403 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AF131216.2-201ENST00000512316 564 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 SETP7-201ENST00000552169 453 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AP001004.1-201ENST00000582468 324 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC105129.3-201ENST00000605455 485 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC239868.4-201ENST00000608318 671 ntBASIC3.3□□□□□ -1.88
FAM49AQ9H0Q0 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms