Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-359P-201ENST00000365466 108 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.436-201ENST00000384097 102 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.553-201ENST00000384670 102 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 MIR135A2-201ENST00000384854 100 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 MIR449B-201ENST00000384995 97 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RPS20P2-201ENST00000402520 389 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RNA5SP344-201ENST00000411081 104 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RPL7P46-201ENST00000425129 740 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 OR4K11P-201ENST00000431829 904 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 SNORD121B-201ENST00000458838 81 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-956P-201ENST00000458868 103 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AP002812.1-201ENST00000495378 474 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 HMGB1P22-201ENST00000505315 124 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-528P-201ENST00000516926 100 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC006362.1-201ENST00000567392 174 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC060771.1-201ENST00000582031 164 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 MIR3158-1-201ENST00000583596 81 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC040904.1-201ENST00000590850 223 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC011451.2-201ENST00000604303 598 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC002550.2-201ENST00000621246 394 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HOXD1Q9GZZ0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL136164.4-201ENST00000625013 2135 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.46-201ENST00000362695 102 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-1155P-201ENST00000363554 107 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 U3.20-201ENST00000390909 217 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC078974.1-201ENST00000411597 223 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC007899.1-201ENST00000412776 775 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL137014.1-201ENST00000420490 1226 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC005019.1-201ENST00000436455 431 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 USP9YP29-201ENST00000445112 563 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 USP9YP12-201ENST00000450481 570 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 CYCSP35-201ENST00000451978 304 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL672167.3-201ENST00000465951 960 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 RPS27AP1-201ENST00000475545 471 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 MTND4P2-201ENST00000507767 1203 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC022447.1-201ENST00000515358 464 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 FABP5P5-201ENST00000515537 406 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 ZNF519P3-201ENST00000557158 1032 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 MTCYBP33-201ENST00000575007 1130 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC012150.2-201ENST00000621300 544 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC009878.1-201ENST00000621819 340 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AL157700.1-201ENST00000561973 1432 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 MTND5P33-201ENST00000571250 1450 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 AC002546.1-201ENST00000588041 2504 ntBASIC3.07□□□□□ -1.92
HOXD1Q9GZZ0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.201-201ENST00000364052 96 ntBASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 MTCO3P12-201ENST00000416718 547 ntBASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
HOXD1Q9GZZ0 MTCO2P34-201ENST00000421994 607 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms