Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.12□□□□□ -1.59
TRIM56Q9BRZ2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.152-201ENST00000363578 100 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RNA5SP507-201ENST00000363603 121 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-379P-201ENST00000363813 104 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-190P-201ENST00000384154 102 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.489-201ENST00000384410 101 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-95P-201ENST00000384697 107 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-817P-201ENST00000391083 104 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.645-201ENST00000391229 102 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 DUTP5-201ENST00000406790 469 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 EIF4A1P3-201ENST00000411521 244 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 OR2AH1P-201ENST00000425717 928 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RPS27P18-201ENST00000431701 247 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AL359672.1-201ENST00000442302 409 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC008264.1-201ENST00000447612 367 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AL691482.1-201ENST00000453255 87 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC117503.1-201ENST00000472241 394 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC026979.1-201ENST00000492525 396 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC104564.1-201ENST00000493028 407 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.668-201ENST00000516233 93 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AP006587.4-201ENST00000526053 529 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL435P-201ENST00000584418 282 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC018889.1-201ENST00000605372 397 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 HMGB1P24-202ENST00000615653 685 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 BX005214.3-202ENST00000619809 325 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC068870.2-201ENST00000620635 389 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AC139769.1-204ENST00000472297 1931 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 AL049555.1-201ENST00000562834 1933 ntBASIC5.11□□□□□ -1.59
TRIM56Q9BRZ2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC025031.4-201ENST00000621248 3271 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.473-201ENST00000384333 102 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 SNORA77-201ENST00000408716 125 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC093655.2-201ENST00000425735 631 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 RPL23AP50-201ENST00000434149 455 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC099799.1-201ENST00000439809 192 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 NEFMP1-201ENST00000443423 1006 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-953P-201ENST00000459154 107 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL222P-201ENST00000476452 299 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL826P-201ENST00000479724 288 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC008953.1-201ENST00000497334 318 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-390P-201ENST00000516259 103 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 SCARNA16.2-201ENST00000516520 172 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC012339.2-201ENST00000523996 453 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AP000827.1-201ENST00000527814 258 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC005868.1-201ENST00000536421 331 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 OR4H12P-201ENST00000556269 907 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC005357.1-201ENST00000588399 301 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC067852.3-201ENST00000589177 561 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC092447.9-201ENST00000603395 144 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC062037.2-201ENST00000610137 73 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC074029.4-201ENST00000624796 1859 ntBASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM56Q9BRZ2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms