Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC097504.2-201ENST00000608088 454 ntBASIC2.18□□□□□ -2.06
CCDC42Q96M95 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
CCDC42Q96M95 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC42Q96M95 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCDC42Q96M95 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC42Q96M95 CENPCP1-201ENST00000533085 2578 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC42Q96M95 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC42Q96M95 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 RPL17P12-201ENST00000413391 526 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC098614.2-201ENST00000426040 255 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 RPL23AP83-201ENST00000434984 473 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 RPL23AP16-201ENST00000441715 421 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 RNU6-928P-201ENST00000516876 104 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 SNORA31.18-201ENST00000517043 134 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 ATP5F1P5-201ENST00000526403 760 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 BNIP3P4-201ENST00000604946 565 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC010378.1-201ENST00000619270 362 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 AC012640.5-201ENST00000623897 319 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 MTND4P35-201ENST00000604257 1375 ntBASIC2.17□□□□□ -2.06
CCDC42Q96M95 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC42Q96M95 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AL024474.1-201ENST00000404655 591 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 AL133384.1-201ENST00000412744 351 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AL049714.1-201ENST00000466686 347 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC012414.2-201ENST00000559474 187 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC023824.2-201ENST00000566185 400 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 SNORD39.3-201ENST00000584451 71 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC005498.1-201ENST00000592125 465 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC073569.3-201ENST00000619055 682 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 AC098657.3-201ENST00000620434 263 ntBASIC2.16□□□□□ -2.06
CCDC42Q96M95 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC42Q96M95 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC42Q96M95 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
CCDC42Q96M95 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AL121978.1-201ENST00000402778 359 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AL122016.1-201ENST00000403365 367 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 SUMO2P12-201ENST00000405924 140 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 MIR1290-201ENST00000408735 78 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AL009174.1-201ENST00000426577 416 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC093422.3-201ENST00000428506 305 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 MYL8P-204ENST00000431574 518 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 ZNF965P-201ENST00000432501 817 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 FGF7P5-201ENST00000441829 291 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 RAC1P7-201ENST00000445367 377 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 HMGN1P5-201ENST00000448591 263 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 RPL23AP23-201ENST00000452590 471 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 MTCO3P11-201ENST00000455103 774 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 MTCO3P2-201ENST00000457365 171 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 MTND4LP3-201ENST00000468320 276 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC104090.1-201ENST00000506341 1171 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 OR5AQ1P-201ENST00000527596 927 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC068135.2-201ENST00000569293 1028 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 AC013444.2-201ENST00000603317 787 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 AP003399.1-201ENST00000637534 361 ntBASIC2.15□□□□□ -2.07
CCDC42Q96M95 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC42Q96M95 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC42Q96M95 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC42Q96M95 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC42Q96M95 RNU6-1035P-201ENST00000384477 107 ntBASIC2.14□□□□□ -2.07
CCDC42Q96M95 MIR525-201ENST00000384978 85 ntBASIC2.14□□□□□ -2.07
CCDC42Q96M95 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC42Q96M95 Z82190.1-201ENST00000454534 490 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms