Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 MIR4284-201ENST00000578924 81 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC007619.2-201ENST00000605743 379 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC007998.5-201ENST00000622938 237 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC243312.2-201ENST00000623340 601 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AL034549.2-201ENST00000618285 3373 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC108751.5-201ENST00000492880 1336 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AP000542.2-201ENST00000623199 6179 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 AC099654.2-201ENST00000433031 1980 ntBASIC5.66□□□□□ -1.5
VTI1AQ96AJ9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RNU6-702P-201ENST00000364982 107 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RN7SKP58-201ENST00000411010 305 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RSL24D1P6-201ENST00000426934 401 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RPL23AP69-201ENST00000431134 458 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC009963.2-201ENST00000453431 138 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 VN1R105P-201ENST00000486595 910 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC026801.2-201ENST00000515352 425 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 RNU6-120P-201ENST00000516077 103 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 Y_RNA.689-201ENST00000516589 107 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AL161670.1-201ENST00000554348 137 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 IGHV3-29-201ENST00000604817 344 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC011373.1-201ENST00000607270 237 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AC099669.2-201ENST00000616549 437 ntBASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.65□□□□□ -1.5
VTI1AQ96AJ9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
VTI1AQ96AJ9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.153-201ENST00000363615 91 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 SET-203ENST00000372688 801 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 RNU6-356P-201ENST00000384140 107 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.645-201ENST00000391229 102 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 MIR1302-3-201ENST00000408128 138 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 RNA5SP113-201ENST00000410486 84 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.618-201ENST00000410949 107 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC099677.1-201ENST00000420575 175 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 PSMA2P3-201ENST00000429685 675 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC128713.1-201ENST00000471495 306 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 MRPS33P2-201ENST00000507850 322 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 RNU6-470P-201ENST00000515954 104 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 RNU1-54P-201ENST00000517181 120 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC012669.1-201ENST00000603209 283 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC104695.3-201ENST00000604052 296 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 NUTF2P8-201ENST00000604593 363 ntBASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTI1AQ96AJ9 AC063976.2-201ENST00000425667 3556 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 AL356489.2-201ENST00000566968 3528 ntBASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTI1AQ96AJ9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms