Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.54□□□□□ -2
TOPBP1Q92547 AC095038.3-201ENST00000634439 195 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TOPBP1Q92547 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TOPBP1Q92547 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TOPBP1Q92547 METTL21EP-201ENST00000298105 713 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 RNA5SP391-201ENST00000363456 119 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 RNU6-185P-201ENST00000384421 107 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.53□□□□□ -2
TOPBP1Q92547 AL136133.1-201ENST00000413694 376 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.53□□□□□ -2
TOPBP1Q92547 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.53□□□□□ -2
TOPBP1Q92547 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.53□□□□□ -2
TOPBP1Q92547 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.53□□□□□ -2
TOPBP1Q92547 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.53□□□□□ -2
TOPBP1Q92547 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
TOPBP1Q92547 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.53□□□□□ -2
TOPBP1Q92547 ZNF92P3-201ENST00000596594 954 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 uc_338.12-201ENST00000616344 181 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 MIR6767-201ENST00000637302 66 ntBASIC2.53□□□□□ -2
TOPBP1Q92547 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.53□□□□□ -2.01
TOPBP1Q92547 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 DNAJC19P6-201ENST00000401853 280 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 AL513185.2-201ENST00000425543 193 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 ARL5AP3-201ENST00000439327 386 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOPBP1Q92547 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 MIR4474-201ENST00000579189 78 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 AL078603.1-201ENST00000603824 313 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 AC093536.2-201ENST00000565257 1406 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOPBP1Q92547 RNA5SP489-201ENST00000410986 109 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.52□□□□□ -2.01
TOPBP1Q92547 AC139103.1-201ENST00000534696 1030 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TOPBP1Q92547 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 MIR4496-201ENST00000635896 61 ntBASIC2.52□□□□□ -2.01
TOPBP1Q92547 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TOPBP1Q92547 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 AL354695.1-201ENST00000427935 228 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.51□□□□□ -2.01
TOPBP1Q92547 AC092155.2-201ENST00000454675 477 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 HMGN1P8-201ENST00000463578 288 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TOPBP1Q92547 AC022079.2-201ENST00000619739 566 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 AL133216.2-202ENST00000634512 349 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.51□□□□□ -2.01
TOPBP1Q92547 OR4G11P-202ENST00000642116 1414 ntBASIC2.51□□□□□ -2.01
TOPBP1Q92547 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
TOPBP1Q92547 AC109583.1-201ENST00000432156 268 ntBASIC2.5□□□□□ -2.01
TOPBP1Q92547 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.5□□□□□ -2.01
TOPBP1Q92547 MTCYBP45-201ENST00000435243 565 ntBASIC2.5□□□□□ -2.01
TOPBP1Q92547 HMGB1P26-201ENST00000452520 628 ntBASIC2.5□□□□□ -2.01
TOPBP1Q92547 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.5□□□□□ -2.01
TOPBP1Q92547 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.5□□□□□ -2.01
TOPBP1Q92547 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
TOPBP1Q92547 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.5□□□□□ -2.01
TOPBP1Q92547 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.5□□□□□ -2.01
TOPBP1Q92547 MTND4P31-201ENST00000425607 1343 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TOPBP1Q92547 RNU4-31P-201ENST00000384211 141 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TOPBP1Q92547 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 AC012181.1-201ENST00000479895 423 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 RN7SKP277-201ENST00000516895 283 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 AL049870.4-201ENST00000555741 486 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 MIR3660-201ENST00000584845 100 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.49□□□□□ -2.01
TOPBP1Q92547 RPL23AP88-201ENST00000605759 454 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 MTND4P1-201ENST00000457501 1466 ntBASIC2.49□□□□□ -2.01
TOPBP1Q92547 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 RNU6-31P-201ENST00000384388 108 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AC241520.1-201ENST00000422654 1099 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 MIR3935-201ENST00000583472 104 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AC245128.3-201ENST00000594721 748 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 DUXAP3-201ENST00000603616 594 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AC006023.2-201ENST00000609916 167 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 AL121594.5-201ENST00000631724 573 ntBASIC2.48□□□□□ -2.01
TOPBP1Q92547 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.48□□□□□ -2.01
TOPBP1Q92547 RNU4-51P-201ENST00000364206 140 ntBASIC2.47□□□□□ -2.01
TOPBP1Q92547 AC023128.2-201ENST00000420880 1223 ntBASIC2.47□□□□□ -2.01
TOPBP1Q92547 AC244098.2-201ENST00000422068 99 ntBASIC2.47□□□□□ -2.01
TOPBP1Q92547 HMGB1P45-201ENST00000435986 653 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms