Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU1-61P-201ENST00000516107 151 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC106028.5-201ENST00000610332 395 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC008083.4-201ENST00000615076 444 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AL031601.2-202ENST00000622650 282 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 MIR3199-2-201ENST00000636243 86 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AL354695.1-201ENST00000427935 228 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AL353898.1-201ENST00000444055 238 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC008427.1-201ENST00000503102 655 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC135279.1-201ENST00000543493 504 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC091932.3-201ENST00000624223 323 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 ERHP2-201ENST00000402323 299 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 PSMA2P3-201ENST00000429685 675 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC023050.1-201ENST00000498198 304 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 OR4R1P-201ENST00000529879 463 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 SYF2P1-201ENST00000550658 413 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 MIR4285-201ENST00000581001 85 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AL133507.1-201ENST00000605269 557 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 OR10AB1P-201ENST00000609613 938 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNU4-72P-201ENST00000410754 173 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC096533.1-201ENST00000411645 353 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AL358075.3-201ENST00000426289 226 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 MED6P1-201ENST00000439659 713 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP220-201ENST00000516298 104 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 PSMA3P-201ENST00000555485 635 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC135178.6-201ENST00000605314 398 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC067838.1-201ENST00000606064 577 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC103710.2-202ENST00000641454 2853 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 MIR1323-201ENST00000408090 73 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP489-201ENST00000410986 109 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RPS29P29-201ENST00000456396 171 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP468-201ENST00000516782 93 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AL035411.2-201ENST00000604022 421 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC098679.5-201ENST00000624394 571 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP27-201ENST00000363839 119 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNU6-461P-201ENST00000364195 107 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNU6-342P-201ENST00000384521 104 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 UBE2V1P5-201ENST00000440070 405 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 snoU109.4-201ENST00000458953 143 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RN7SL274P-201ENST00000492268 272 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 OR5BM1P-201ENST00000512021 366 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AL591034.1-201ENST00000407447 340 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP38-201ENST00000410750 119 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 HMGN1P33-201ENST00000432945 451 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 PIGFP3-201ENST00000441918 722 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC090096.1-201ENST00000489168 390 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 SNORA31.23-201ENST00000517219 133 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 AC104307.1-201ENST00000616142 196 ntBASIC1.11□□□□□ -2.23
ALMS1Q8TCU4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC109464.2-201ENST00000510242 943 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MTCO2P32-201ENST00000514865 403 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC112503.2-201ENST00000609005 552 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MTCO1P4-201ENST00000520516 1409 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MTND4P1-201ENST00000457501 1466 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 HMGB1P45-201ENST00000435986 653 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 RNA5SP61-201ENST00000516453 100 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 RNU1-42P-201ENST00000364033 160 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 RNU6-1077P-201ENST00000410506 102 ntBASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ALMS1Q8TCU4 MIR4419B-201ENST00000577260 68 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms