Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC073464.1-201ENST00000429823 534 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 Z82210.1-201ENST00000440037 231 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 RPS27AP17-201ENST00000463344 455 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 SNORA31.1-201ENST00000515993 133 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 SNORA31.5-201ENST00000516190 133 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AMZ2P1-203ENST00000565833 850 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC025449.1-201ENST00000603896 529 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC008745.1-201ENST00000604064 271 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC068831.8-201ENST00000620171 435 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AL359880.1-201ENST00000621879 266 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC006111.3-201ENST00000622137 383 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 MIR6863-201ENST00000636112 90 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC021146.4-201ENST00000309229 279 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 Y_RNA.1-201ENST00000352915 104 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-1097P-201ENST00000363586 107 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-960P-201ENST00000364056 120 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-701P-201ENST00000384059 107 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-780P-201ENST00000391030 104 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 SNORD66.1-201ENST00000391230 76 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RNA5SP397-201ENST00000391323 118 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 SDHCP2-201ENST00000398565 501 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 SDCBPP3-201ENST00000419629 891 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AL512844.2-201ENST00000433990 593 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AL359265.2-201ENST00000434367 631 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RPL23AP89-201ENST00000439324 255 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RN7SL432P-201ENST00000484057 298 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 RPL7P47-201ENST00000497299 556 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 ARL4AP2-201ENST00000507378 601 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC093840.1-201ENST00000511599 336 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 MTND1P5-201ENST00000517906 940 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC024619.4-201ENST00000580924 316 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 MIR3609-201ENST00000582661 80 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC068790.4-201ENST00000602474 263 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AP003465.2-201ENST00000602571 373 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC007684.1-201ENST00000609671 477 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 AC009161.2-201ENST00000624626 138 ntBASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PPP4R4Q6NUP7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.09□□□□□ -1.76
PPP4R4Q6NUP7 RAD17P1-201ENST00000418130 2042 ntBASIC4.09□□□□□ -1.76
PPP4R4Q6NUP7 AL137003.2-201ENST00000606924 2538 ntBASIC4.09□□□□□ -1.76
PPP4R4Q6NUP7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 Y_RNA.6-201ENST00000362350 114 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 SNORA70F-201ENST00000384142 135 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-456P-201ENST00000384493 107 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 MTCO3P40-201ENST00000392516 676 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC068050.1-201ENST00000394891 380 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RPL17P50-201ENST00000396131 546 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 SOD2P1-201ENST00000396543 562 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RPL7AP25-201ENST00000423357 805 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RPEP3-201ENST00000425462 676 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 MTND3P21-201ENST00000433774 331 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 MTATP6P16-201ENST00000434543 526 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RPS20P5-201ENST00000434808 360 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC002486.1-201ENST00000435098 391 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 HMGN2P13-201ENST00000476476 274 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms