Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 AC009977.1-201ENST00000586015 570 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.75□□□□□ -1.81
HDAC4P56524 SRGNP1-201ENST00000603392 451 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 SEPT7P9-203ENST00000604116 343 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AL136363.2-201ENST00000604173 851 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC006077.1-201ENST00000604746 343 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AC098614.4-201ENST00000607601 462 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 AL391813.2-201ENST00000609113 322 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 TUG1_1.1-201ENST00000610654 145 ntBASIC3.75□□□□□ -1.81
HDAC4P56524 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HDAC4P56524 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 AC092125.1-201ENST00000562568 1995 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 SNORD9-201ENST00000362566 104 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RNU6-1155P-201ENST00000363554 107 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 MIR184-201ENST00000384962 84 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 SNORA40.3-201ENST00000390964 122 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.74□□□□□ -1.81
HDAC4P56524 Y_RNA.598-201ENST00000410480 95 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RNU2-66P-201ENST00000410650 161 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RAB9AP3-201ENST00000412737 573 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 OR1AA1P-201ENST00000419597 916 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 DUTP6-201ENST00000425573 462 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC079780.1-201ENST00000428259 207 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 NEK4P1-201ENST00000433383 879 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RAB9AP1-201ENST00000449393 573 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 MTND1P9-201ENST00000453775 944 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 SNORA70.18-201ENST00000516696 98 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AP006245.1-201ENST00000522549 120 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.74□□□□□ -1.81
HDAC4P56524 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.74□□□□□ -1.81
HDAC4P56524 AC079089.3-201ENST00000603094 673 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AL139286.2-201ENST00000606838 396 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC004492.1-201ENST00000607036 742 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC006566.1-201ENST00000608943 513 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 RMST_8.1-201ENST00000610287 165 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC005332.10-201ENST00000612725 619 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 AC012314.7-201ENST00000619693 93 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC015967.1-201ENST00000619893 476 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 AC099842.1-201ENST00000619919 596 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 PLCE1P1-201ENST00000622094 305 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HDAC4P56524 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HDAC4P56524 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC4P56524 MTND4P5-201ENST00000435821 1374 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 ZNF285B-201ENST00000561698 1767 ntBASIC3.74□□□□□ -1.81
HDAC4P56524 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HDAC4P56524 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
HDAC4P56524 SRP72P2-201ENST00000344851 1979 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC011460.1-201ENST00000636268 1834 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC007496.3-201ENST00000624987 3443 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 RNA5SP295-201ENST00000362655 121 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 U3.39-201ENST00000408569 239 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 Y_RNA.599-201ENST00000410489 109 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AL031779.1-201ENST00000415663 330 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 MTCO1P21-201ENST00000416634 589 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 SYF2P2-201ENST00000417620 583 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC006989.1-201ENST00000427212 131 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HDAC4P56524 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.73□□□□□ -1.81
HDAC4P56524 AP002884.2-201ENST00000471647 395 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.73□□□□□ -1.81
HDAC4P56524 LARP1BP2-201ENST00000486594 519 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC093278.1-201ENST00000494700 600 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 HMGN1P11-201ENST00000508668 303 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 RNU1-95P-201ENST00000516357 160 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 RNU1-128P-201ENST00000516704 160 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 TRMT10BP1-201ENST00000519377 943 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
HDAC4P56524 SNRPGP16-201ENST00000533275 226 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HDAC4P56524 AL391156.1-201ENST00000554965 554 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC4P56524 ZNF415P1-201ENST00000582279 1166 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC011468.4-201ENST00000603942 409 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AP001330.4-201ENST00000604350 154 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC4P56524 AL355472.4-201ENST00000610233 626 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC131902.3-201ENST00000611767 581 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AL589743.7-201ENST00000612637 233 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 AC138932.5-201ENST00000617759 563 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.73□□□□□ -1.81
HDAC4P56524 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC4P56524 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms