Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
COPB1P53618 U7.8-201ENST00000619968 63 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC092794.2-201ENST00000620933 563 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL356585.4-201ENST00000623078 1229 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC019226.1-201ENST00000625666 515 ntBASIC4.01□□□□□ -1.77
COPB1P53618 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 FAM91A3P-201ENST00000456826 2544 ntBASIC4.01□□□□□ -1.77
COPB1P53618 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COPB1P53618 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
COPB1P53618 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COPB1P53618 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 RNU6-1085P-201ENST00000363576 107 ntBASIC4□□□□□ -1.77
COPB1P53618 RNVU1-3-201ENST00000364313 161 ntBASIC4□□□□□ -1.77
COPB1P53618 RNU6-534P-201ENST00000364877 106 ntBASIC4□□□□□ -1.77
COPB1P53618 RNU6-169P-201ENST00000365336 107 ntBASIC4□□□□□ -1.77
COPB1P53618 RNA5SP235-201ENST00000365411 114 ntBASIC4□□□□□ -1.77
COPB1P53618 AL136116.1-201ENST00000403591 381 ntBASIC4□□□□□ -1.77
COPB1P53618 RN7SKP177-201ENST00000410567 355 ntBASIC4□□□□□ -1.77
COPB1P53618 RN7SKP159-201ENST00000410657 292 ntBASIC4□□□□□ -1.77
COPB1P53618 CYCSP19-201ENST00000411715 316 ntBASIC4□□□□□ -1.77
COPB1P53618 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4□□□□□ -1.77
COPB1P53618 OR51AB1P-201ENST00000429046 620 ntBASIC4□□□□□ -1.77
COPB1P53618 AC006946.1-201ENST00000429106 328 ntBASIC4□□□□□ -1.77
COPB1P53618 FTH1P6-201ENST00000430768 320 ntBASIC4□□□□□ -1.77
COPB1P53618 AC007389.2-201ENST00000434630 306 ntBASIC4□□□□□ -1.77
COPB1P53618 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4□□□□□ -1.77
COPB1P53618 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 USP9YP15-201ENST00000442391 422 ntBASIC4□□□□□ -1.77
COPB1P53618 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 RPS20P24-201ENST00000457473 361 ntBASIC4□□□□□ -1.77
COPB1P53618 RN7SL542P-201ENST00000467147 294 ntBASIC4□□□□□ -1.77
COPB1P53618 AC084357.1-201ENST00000473404 255 ntBASIC4□□□□□ -1.77
COPB1P53618 RPS29P25-201ENST00000481709 171 ntBASIC4□□□□□ -1.77
COPB1P53618 VN1R105P-201ENST00000486595 910 ntBASIC4□□□□□ -1.77
COPB1P53618 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AC026784.1-201ENST00000507986 352 ntBASIC4□□□□□ -1.77
COPB1P53618 RNU6-27P-201ENST00000516146 107 ntBASIC4□□□□□ -1.77
COPB1P53618 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AP003072.2-201ENST00000527756 676 ntBASIC4□□□□□ -1.77
COPB1P53618 AP000907.2-201ENST00000530827 353 ntBASIC4□□□□□ -1.77
COPB1P53618 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 AL121579.1-201ENST00000555129 305 ntBASIC4□□□□□ -1.77
COPB1P53618 AL512360.1-201ENST00000555346 234 ntBASIC4□□□□□ -1.77
COPB1P53618 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AC060771.1-201ENST00000582031 164 ntBASIC4□□□□□ -1.77
COPB1P53618 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4□□□□□ -1.77
COPB1P53618 AC005255.1-201ENST00000593748 216 ntBASIC4□□□□□ -1.77
COPB1P53618 AL009028.1-201ENST00000604895 802 ntBASIC4□□□□□ -1.77
COPB1P53618 AP001330.5-201ENST00000607176 411 ntBASIC4□□□□□ -1.77
COPB1P53618 RNVU1-4-201ENST00000612985 164 ntBASIC4□□□□□ -1.77
COPB1P53618 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 AP000553.6-201ENST00000641242 118 ntBASIC4□□□□□ -1.77
COPB1P53618 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
COPB1P53618 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4□□□□□ -1.77
COPB1P53618 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COPB1P53618 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4□□□□□ -1.77
COPB1P53618 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
COPB1P53618 PABPC1P7-201ENST00000413177 1513 ntBASIC4□□□□□ -1.77
COPB1P53618 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4□□□□□ -1.77
COPB1P53618 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 Y_RNA.89-201ENST00000363031 102 ntBASIC3.99□□□□□ -1.77
COPB1P53618 RNY4P16-201ENST00000364768 94 ntBASIC3.99□□□□□ -1.77
COPB1P53618 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 RNU6-483P-201ENST00000384088 108 ntBASIC3.99□□□□□ -1.77
COPB1P53618 SNORD51-201ENST00000384320 80 ntBASIC3.99□□□□□ -1.77
COPB1P53618 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COPB1P53618 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 AL139247.1-201ENST00000422768 325 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 MTCO1P20-201ENST00000425366 358 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 AL121601.2-201ENST00000438019 707 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 RPL23AP20-201ENST00000447965 421 ntBASIC3.99□□□□□ -1.77
COPB1P53618 MRPS31P2-201ENST00000451581 518 ntBASIC3.99□□□□□ -1.77
COPB1P53618 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms