Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MTCYBP1-201ENST00000454315 1119 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 SNORD121B-201ENST00000458838 81 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RN7SL330P-201ENST00000469709 307 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 ST13P14-201ENST00000474095 734 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RPL37P25-201ENST00000507308 276 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RN7SKP13-201ENST00000515933 244 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RN7SKP83-201ENST00000516512 178 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RNU2-46P-201ENST00000517038 113 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RNU6-201P-201ENST00000517100 61 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 OR5B10P-201ENST00000532869 642 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCNKAP51800 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCNKAP51800 AC126177.3-201ENST00000551839 688 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC099489.2-201ENST00000574976 260 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCNKAP51800 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCNKAP51800 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCNKAP51800 KLKP1-201ENST00000595979 403 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC006077.1-201ENST00000604746 343 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC091834.1-201ENST00000614543 472 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCNKAP51800 AC002550.2-201ENST00000621246 394 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC068792.1-201ENST00000621354 417 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AF117829.1-206ENST00000621883 3802 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AP003355.3-201ENST00000623465 114 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC112204.3-201ENST00000623822 332 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AC010149.2-201ENST00000637608 315 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCNKAP51800 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCNKAP51800 AC007656.2-201ENST00000624902 4547 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CLCNKAP51800 AC011460.1-201ENST00000636268 1834 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCNKAP51800 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLCNKAP51800 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCNKAP51800 AC009902.3-201ENST00000606235 2172 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCNKAP51800 FRG1BP-201ENST00000278882 761 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLCNKAP51800 U8.3-201ENST00000363321 132 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 RNU6-1215P-201ENST00000384441 102 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 MIR7-3-201ENST00000384898 110 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 MIR218-2-201ENST00000385006 110 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.51□□□□□ -1.85
CLCNKAP51800 RNU6-712P-201ENST00000410558 100 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCNKAP51800 RPS7P15-201ENST00000415804 584 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AL353777.1-201ENST00000425552 326 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCNKAP51800 FTH1P1-201ENST00000437933 532 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC073614.1-201ENST00000438690 650 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.51□□□□□ -1.85
CLCNKAP51800 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC023598.1-201ENST00000472521 361 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 HMGB1P22-201ENST00000505315 124 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCNKAP51800 RNU6-528P-201ENST00000516926 100 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AP000907.2-201ENST00000530827 353 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCNKAP51800 CR383656.7-201ENST00000548164 174 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AL356432.3-201ENST00000568952 465 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 EIF1P4-201ENST00000572664 335 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 OR4K8P-201ENST00000578842 1048 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CLCNKAP51800 AP001029.3-201ENST00000588063 596 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 CKS1BP3-201ENST00000600888 237 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC006254.3-201ENST00000603353 884 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC091304.9-201ENST00000612091 226 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC015967.1-201ENST00000619893 476 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AL356585.4-201ENST00000623078 1229 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLCNKAP51800 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLCNKAP51800 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.51□□□□□ -1.85
CLCNKAP51800 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC244517.1-201ENST00000606030 2086 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CLCNKAP51800 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 GNG5P1-201ENST00000255500 204 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 RNA5SP235-201ENST00000365411 114 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 Y_RNA.516-201ENST00000384541 124 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLCNKAP51800 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms