Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PTPN9P43378 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
PTPN9P43378 AC068647.1-201ENST00000489539 2265 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTPN9P43378 Y_RNA.3-201ENST00000362331 103 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RNU4-1-201ENST00000363925 141 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RNY4P34-201ENST00000364779 95 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RNA5SP189-201ENST00000364920 115 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.71□□□□□ -1.82
PTPN9P43378 RNU6-1181P-201ENST00000384191 106 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RNU4-65P-201ENST00000410473 140 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RNU2-62P-201ENST00000410868 191 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RAB9AP3-201ENST00000412737 573 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.71□□□□□ -1.82
PTPN9P43378 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPN9P43378 PIGFP2-201ENST00000421400 651 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.71□□□□□ -1.82
PTPN9P43378 MTND3P21-201ENST00000433774 331 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 AL133547.1-201ENST00000448546 220 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RAB9AP1-201ENST00000449393 573 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 AL359385.1-201ENST00000456509 365 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 RPL9P32-201ENST00000464118 620 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 SNORA31.20-201ENST00000517111 133 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 AP004242.1-201ENST00000533701 349 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC245505.1-201ENST00000556398 224 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.71□□□□□ -1.82
PTPN9P43378 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN9P43378 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPN9P43378 AC005951.1-201ENST00000576706 485 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 MIR3913-1-201ENST00000577744 102 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 OR4K8P-201ENST00000578842 1048 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AL022154.1-201ENST00000604698 785 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AL109618.2-201ENST00000605527 211 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC015967.1-201ENST00000619893 476 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC099842.1-201ENST00000619919 596 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC073534.2-201ENST00000620377 381 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC039056.2-201ENST00000622261 511 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN9P43378 MTND5P26-201ENST00000426018 1752 ntBASIC3.71□□□□□ -1.82
PTPN9P43378 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN9P43378 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPN9P43378 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPN9P43378 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPN9P43378 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 SNORA5A-201ENST00000384111 134 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RNU6-432P-201ENST00000384196 109 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTPN9P43378 RNU6-882P-201ENST00000391025 103 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPN9P43378 Y_RNA.599-201ENST00000410489 109 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPN9P43378 SYF2P2-201ENST00000417620 583 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RPS3AP44-201ENST00000425466 790 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC137499.1-201ENST00000427602 88 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC018644.1-201ENST00000429934 551 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 OR4K11P-201ENST00000431829 904 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 ARPC3P1-201ENST00000437218 533 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 USP9YP15-201ENST00000442391 422 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 NPM1P49-201ENST00000448027 714 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 HMGB3P8-201ENST00000449709 577 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPN9P43378 snoU13.24-201ENST00000458998 104 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RN7SL542P-201ENST00000467147 294 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AL358832.1-201ENST00000497800 389 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC021146.1-201ENST00000511202 716 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC026801.2-201ENST00000515352 425 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 RNU6-798P-201ENST00000516912 103 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPN9P43378 AP003072.2-201ENST00000527756 676 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 DEFB108A-201ENST00000530110 222 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.7□□□□□ -1.82
PTPN9P43378 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.7□□□□□ -1.82
PTPN9P43378 AC026333.2-201ENST00000542164 106 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AL133153.1-201ENST00000557756 303 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AL391840.1-201ENST00000571144 367 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC010591.1-201ENST00000603941 649 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AL391813.2-201ENST00000609113 322 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC245517.5-201ENST00000611529 162 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC112204.3-201ENST00000623822 332 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC110994.2-201ENST00000635481 492 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.7□□□□□ -1.82
PTPN9P43378 PRO1804-201ENST00000623780 2050 ntBASIC3.7□□□□□ -1.82
PTPN9P43378 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTPN9P43378 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPN9P43378 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN9P43378 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms