Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LTBRP36941 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 MIR369-201ENST00000362155 70 ntBASIC4.58□□□□□ -1.68
LTBRP36941 Y_RNA.128-201ENST00000363391 112 ntBASIC4.58□□□□□ -1.68
LTBRP36941 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBRP36941 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 RNY4P36-201ENST00000391116 96 ntBASIC4.58□□□□□ -1.68
LTBRP36941 RPL37P10-201ENST00000412884 288 ntBASIC4.58□□□□□ -1.68
LTBRP36941 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AL157831.1-201ENST00000426134 473 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBRP36941 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 RPL35AP21-201ENST00000437667 333 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.58□□□□□ -1.68
LTBRP36941 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.58□□□□□ -1.68
LTBRP36941 AC012158.1-204ENST00000483430 465 ntBASIC4.58□□□□□ -1.68
LTBRP36941 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 TRBVA-201ENST00000498804 316 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBRP36941 AC099522.1-202ENST00000514718 367 ntBASIC4.58□□□□□ -1.68
LTBRP36941 RNU6-1045P-201ENST00000516321 107 ntBASIC4.58□□□□□ -1.68
LTBRP36941 RNA5SP519-201ENST00000516480 119 ntBASIC4.58□□□□□ -1.68
LTBRP36941 RNU6-256P-201ENST00000516747 97 ntBASIC4.58□□□□□ -1.68
LTBRP36941 RNU6-566P-201ENST00000516790 107 ntBASIC4.58□□□□□ -1.68
LTBRP36941 HMGB1P19-201ENST00000517578 577 ntBASIC4.58□□□□□ -1.68
LTBRP36941 MIR4790-201ENST00000577799 79 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AL138889.2-201ENST00000603883 242 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AC012468.1-201ENST00000604888 430 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AC080078.3-201ENST00000605407 463 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.58□□□□□ -1.68
LTBRP36941 AC103705.1-201ENST00000619013 241 ntBASIC4.58□□□□□ -1.68
LTBRP36941 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 THAP12P5-201ENST00000405864 2275 ntBASIC4.58□□□□□ -1.68
LTBRP36941 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LTBRP36941 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LTBRP36941 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LTBRP36941 AL133243.3-201ENST00000617415 3004 ntBASIC4.57□□□□□ -1.68
LTBRP36941 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 DDX18P3-201ENST00000404856 2007 ntBASIC4.57□□□□□ -1.68
LTBRP36941 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 RNU1-14P-201ENST00000362759 152 ntBASIC4.57□□□□□ -1.68
LTBRP36941 SNORA4.3-201ENST00000365564 137 ntBASIC4.57□□□□□ -1.68
LTBRP36941 SNORD42.2-201ENST00000365570 69 ntBASIC4.57□□□□□ -1.68
LTBRP36941 SNORA9-201ENST00000384215 133 ntBASIC4.57□□□□□ -1.68
LTBRP36941 RNU6-1304P-201ENST00000411374 106 ntBASIC4.57□□□□□ -1.68
LTBRP36941 RNA5SP111-201ENST00000411386 101 ntBASIC4.57□□□□□ -1.68
LTBRP36941 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 PPP1R11P2-201ENST00000423543 382 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AC091390.3-201ENST00000426478 338 ntBASIC4.57□□□□□ -1.68
LTBRP36941 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBRP36941 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 NEFMP1-201ENST00000443423 1006 ntBASIC4.57□□□□□ -1.68
LTBRP36941 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 TRBV1-201ENST00000476502 284 ntBASIC4.57□□□□□ -1.68
LTBRP36941 HIGD1AP13-201ENST00000509878 289 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 AC005741.1-201ENST00000511094 432 ntBASIC4.57□□□□□ -1.68
LTBRP36941 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBRP36941 SCARNA13-201ENST00000516672 275 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AP006587.4-201ENST00000526053 529 ntBASIC4.57□□□□□ -1.68
LTBRP36941 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
LTBRP36941 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 MIR3672-201ENST00000584290 82 ntBASIC4.57□□□□□ -1.68
LTBRP36941 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBRP36941 AL354984.3-201ENST00000604803 325 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AC091953.5-201ENST00000622919 233 ntBASIC4.57□□□□□ -1.68
LTBRP36941 AL445363.3-201ENST00000623080 671 ntBASIC4.57□□□□□ -1.68
LTBRP36941 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBRP36941 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBRP36941 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 AL139811.1-201ENST00000424779 2299 ntBASIC4.57□□□□□ -1.68
LTBRP36941 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
LTBRP36941 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LTBRP36941 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBRP36941 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBRP36941 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms