Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL162389.1-201ENST00000449233 177 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 RNU6-1132P-201ENST00000459214 107 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 RPS23P7-201ENST00000466210 444 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC010631.1-201ENST00000474150 156 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD8P13378 RNU6-677P-201ENST00000516914 101 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 RNU6-709P-201ENST00000517257 104 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 TOMM20P2-201ENST00000540082 421 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 MIR1254-2-201ENST00000579553 63 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC125232.2-201ENST00000592457 143 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC016727.2-201ENST00000603988 621 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC116447.1-201ENST00000613153 453 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 BX005214.3-202ENST00000619809 325 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 MTND5P27-201ENST00000428871 1720 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXD8P13378 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 AL137003.2-201ENST00000606924 2538 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 MIR517A-201ENST00000385001 87 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 PGBD4P6-201ENST00000421501 610 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 AL391219.1-201ENST00000422570 483 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 HMGN2P27-201ENST00000427352 270 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 HMGB1P9-201ENST00000429856 646 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 AL591704.1-201ENST00000432574 275 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXD8P13378 NEFMP1-201ENST00000443423 1006 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXD8P13378 AC018437.1-201ENST00000492214 406 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 RPL36AP41-201ENST00000493820 306 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 RNA5SP230-201ENST00000517039 122 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 Y_RNA.715-201ENST00000517082 110 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 AC009643.1-201ENST00000532030 391 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXD8P13378 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD8P13378 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD8P13378 AC093249.4-201ENST00000564755 259 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 AL356218.2-201ENST00000605264 187 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 AC009229.4-201ENST00000623854 1947 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXD8P13378 AL022311.1-201ENST00000623726 19416 ntBASIC5.3□□□□□ -1.56
HOXD8P13378 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD8P13378 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD8P13378 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HOXD8P13378 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 AC010266.2-201ENST00000564741 3255 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD8P13378 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD8P13378 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXD8P13378 SAMMSON-213ENST00000641336 1521 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD8P13378 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD8P13378 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD8P13378 SNORA70.2-201ENST00000364506 135 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 SNORA23-201ENST00000365128 182 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 RNU6-339P-201ENST00000384310 107 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 U3.22-201ENST00000391120 215 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 ENSAP1-201ENST00000392855 326 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 AL732292.1-201ENST00000426692 226 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 CEACAMP1-201ENST00000434624 1035 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 CYCSP43-201ENST00000438233 310 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD8P13378 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.29□□□□□ -1.56
HOXD8P13378 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXD8P13378 HSPE1P20-201ENST00000538133 289 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD8P13378 RN7SL652P-201ENST00000577769 300 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 HMGN2P28-201ENST00000606102 262 ntBASIC5.29□□□□□ -1.56
HOXD8P13378 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXD8P13378 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXD8P13378 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD8P13378 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms