Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 YPEL5P1-201ENST00000419731 367 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 AL158071.1-201ENST00000430315 461 ntBASIC3.59□□□□□ -1.83
RB1P06400 RPL26P6-201ENST00000440913 438 ntBASIC3.59□□□□□ -1.83
RB1P06400 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.59□□□□□ -1.83
RB1P06400 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 TPT1P14-201ENST00000448018 505 ntBASIC3.59□□□□□ -1.83
RB1P06400 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 KATNBL1P6-201ENST00000453433 915 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC006445.1-201ENST00000491925 405 ntBASIC3.59□□□□□ -1.83
RB1P06400 CBX3P3-201ENST00000508108 532 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC109464.2-201ENST00000510242 943 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC010486.3-201ENST00000511602 785 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC116347.2-201ENST00000514912 523 ntBASIC3.59□□□□□ -1.83
RB1P06400 RPL12P22-201ENST00000519073 490 ntBASIC3.59□□□□□ -1.83
RB1P06400 AC008489.1-201ENST00000524271 483 ntBASIC3.59□□□□□ -1.83
RB1P06400 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 AL163153.1-201ENST00000554223 283 ntBASIC3.59□□□□□ -1.83
RB1P06400 AL391156.1-201ENST00000554965 554 ntBASIC3.59□□□□□ -1.83
RB1P06400 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.59□□□□□ -1.83
RB1P06400 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.59□□□□□ -1.83
RB1P06400 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.59□□□□□ -1.83
RB1P06400 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.59□□□□□ -1.83
RB1P06400 AC091931.1-201ENST00000623488 728 ntBASIC3.59□□□□□ -1.83
RB1P06400 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RB1P06400 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.59□□□□□ -1.83
RB1P06400 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.84
RB1P06400 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
RB1P06400 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RB1P06400 RPL5P18-201ENST00000406671 891 ntBASIC3.58□□□□□ -1.84
RB1P06400 RNU4-65P-201ENST00000410473 140 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC007899.1-201ENST00000412776 775 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.58□□□□□ -1.84
RB1P06400 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 PPP1R11P2-201ENST00000423543 382 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC233728.2-201ENST00000425348 757 ntBASIC3.58□□□□□ -1.84
RB1P06400 BMI1P1-201ENST00000445879 941 ntBASIC3.58□□□□□ -1.84
RB1P06400 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 EPS15P1-201ENST00000448836 336 ntBASIC3.58□□□□□ -1.84
RB1P06400 RPL36AP33-201ENST00000450395 310 ntBASIC3.58□□□□□ -1.84
RB1P06400 MTCO1P42-201ENST00000457379 726 ntBASIC3.58□□□□□ -1.84
RB1P06400 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 RPS27AP1-201ENST00000475545 471 ntBASIC3.58□□□□□ -1.84
RB1P06400 RPS3AP50-201ENST00000487064 803 ntBASIC3.58□□□□□ -1.84
RB1P06400 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
RB1P06400 SNORA31.22-201ENST00000517204 135 ntBASIC3.58□□□□□ -1.84
RB1P06400 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.58□□□□□ -1.84
RB1P06400 AP002404.1-201ENST00000532005 451 ntBASIC3.58□□□□□ -1.84
RB1P06400 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.58□□□□□ -1.84
RB1P06400 AL133271.1-201ENST00000538229 291 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 HIGD1AP1-201ENST00000550979 275 ntBASIC3.58□□□□□ -1.84
RB1P06400 OR4T1P-201ENST00000554933 911 ntBASIC3.58□□□□□ -1.84
RB1P06400 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.58□□□□□ -1.84
RB1P06400 AC008507.1-201ENST00000587506 734 ntBASIC3.58□□□□□ -1.84
RB1P06400 AL022161.1-201ENST00000604390 213 ntBASIC3.58□□□□□ -1.84
RB1P06400 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.58□□□□□ -1.84
RB1P06400 AC004067.1-201ENST00000608733 700 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
RB1P06400 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.58□□□□□ -1.84
RB1P06400 AC093591.3-201ENST00000634516 308 ntBASIC3.58□□□□□ -1.84
RB1P06400 MIR3974-201ENST00000637126 96 ntBASIC3.58□□□□□ -1.84
RB1P06400 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.58□□□□□ -1.84
RB1P06400 AC005832.2-201ENST00000538921 1430 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC021755.1-201ENST00000559747 1447 ntBASIC3.58□□□□□ -1.84
RB1P06400 AC092326.2-201ENST00000624772 1561 ntBASIC3.58□□□□□ -1.84
RB1P06400 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RB1P06400 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 AC004944.1-201ENST00000517807 3059 ntBASIC3.57□□□□□ -1.84
RB1P06400 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
RB1P06400 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RB1P06400 RNU6-809P-201ENST00000384461 107 ntBASIC3.57□□□□□ -1.84
RB1P06400 RPL21P32-201ENST00000419877 477 ntBASIC3.57□□□□□ -1.84
RB1P06400 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.57□□□□□ -1.84
RB1P06400 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 FTH1P25-201ENST00000447665 469 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC140076.1-201ENST00000449897 361 ntBASIC3.57□□□□□ -1.84
RB1P06400 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.57□□□□□ -1.84
RB1P06400 AC012181.1-201ENST00000479895 423 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC080014.1-201ENST00000496877 1201 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.57□□□□□ -1.84
RB1P06400 RNU6-1003P-201ENST00000517099 105 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.57□□□□□ -1.84
RB1P06400 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 ERHP1-201ENST00000523006 310 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms