Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
RNF40O75150 OR3A2-201ENST00000408891 1076 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RNU6-257P-201ENST00000410238 98 ntBASIC6.12□□□□□ -1.43
RNF40O75150 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF40O75150 AC126120.1-201ENST00000431082 470 ntBASIC6.12□□□□□ -1.43
RNF40O75150 GAPDHP58-201ENST00000438477 1006 ntBASIC6.12□□□□□ -1.43
RNF40O75150 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 AC234775.1-201ENST00000454247 670 ntBASIC6.12□□□□□ -1.43
RNF40O75150 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF40O75150 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 AC083795.1-201ENST00000491760 320 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RN7SL57P-201ENST00000493687 290 ntBASIC6.12□□□□□ -1.43
RNF40O75150 ANXA2P1-201ENST00000505539 926 ntBASIC6.12□□□□□ -1.43
RNF40O75150 Y_RNA.679-201ENST00000516416 91 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RNA5SP230-201ENST00000517039 122 ntBASIC6.12□□□□□ -1.43
RNF40O75150 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF40O75150 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF40O75150 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF40O75150 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF40O75150 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF40O75150 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF40O75150 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF40O75150 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF40O75150 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF40O75150 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF40O75150 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RNF40O75150 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF40O75150 AC007685.1-201ENST00000329806 452 ntBASIC6.11□□□□□ -1.43
RNF40O75150 RNU6-1301P-201ENST00000362724 104 ntBASIC6.11□□□□□ -1.43
RNF40O75150 U3.6-201ENST00000363622 211 ntBASIC6.11□□□□□ -1.43
RNF40O75150 RNA5SP500-201ENST00000364486 119 ntBASIC6.11□□□□□ -1.43
RNF40O75150 Y_RNA.405-201ENST00000383979 100 ntBASIC6.11□□□□□ -1.43
RNF40O75150 Y_RNA.451-201ENST00000384200 100 ntBASIC6.11□□□□□ -1.43
RNF40O75150 Y_RNA.524-201ENST00000384564 100 ntBASIC6.11□□□□□ -1.43
RNF40O75150 Y_RNA.561-201ENST00000384694 100 ntBASIC6.11□□□□□ -1.43
RNF40O75150 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF40O75150 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF40O75150 CRIP1P1-201ENST00000427567 185 ntBASIC6.11□□□□□ -1.43
RNF40O75150 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF40O75150 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF40O75150 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF40O75150 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF40O75150 U8.21-201ENST00000459536 136 ntBASIC6.11□□□□□ -1.43
RNF40O75150 YWHAEP4-201ENST00000505390 198 ntBASIC6.11□□□□□ -1.43
RNF40O75150 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF40O75150 OR7E18P-201ENST00000592589 702 ntBASIC6.11□□□□□ -1.43
RNF40O75150 AC138965.3-201ENST00000623875 498 ntBASIC6.11□□□□□ -1.43
RNF40O75150 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RNF40O75150 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF40O75150 AC092376.2-201ENST00000622621 4116 ntBASIC6.11□□□□□ -1.43
RNF40O75150 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
RNF40O75150 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF40O75150 AC100778.3-201ENST00000580060 1750 ntBASIC6.11□□□□□ -1.43
RNF40O75150 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF40O75150 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF40O75150 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF40O75150 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 SELENOWP1-201ENST00000322792 252 ntBASIC6.1□□□□□ -1.43
RNF40O75150 MYL6P5-201ENST00000412707 459 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AC063979.1-201ENST00000415539 377 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AL096701.2-201ENST00000416920 238 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AF186996.5-201ENST00000418098 904 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AC005002.2-201ENST00000438228 269 ntBASIC6.1□□□□□ -1.43
RNF40O75150 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
RNF40O75150 RANP8-201ENST00000444720 713 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AL596266.1-201ENST00000448132 400 ntBASIC6.1□□□□□ -1.43
RNF40O75150 TPT1P12-201ENST00000448968 492 ntBASIC6.1□□□□□ -1.43
RNF40O75150 RPL30P1-201ENST00000488676 339 ntBASIC6.1□□□□□ -1.43
RNF40O75150 MRPS33P2-201ENST00000507850 322 ntBASIC6.1□□□□□ -1.43
RNF40O75150 RNU5F-8P-201ENST00000515941 111 ntBASIC6.1□□□□□ -1.43
RNF40O75150 RNU6-426P-201ENST00000516464 97 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AC103783.1-201ENST00000520506 373 ntBASIC6.1□□□□□ -1.43
RNF40O75150 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF40O75150 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF40O75150 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF40O75150 RPL23AP78-201ENST00000599928 470 ntBASIC6.1□□□□□ -1.43
RNF40O75150 RPL7P50-201ENST00000600588 727 ntBASIC6.1□□□□□ -1.43
RNF40O75150 SNORD113-5-201ENST00000607261 78 ntBASIC6.1□□□□□ -1.43
RNF40O75150 AC100821.1-201ENST00000523153 2479 ntBASIC6.1□□□□□ -1.43
RNF40O75150 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF40O75150 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 AC000374.1-201ENST00000434698 1745 ntBASIC6.1□□□□□ -1.43
RNF40O75150 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RNF40O75150 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF40O75150 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
RNF40O75150 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF40O75150 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF40O75150 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms