Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 SPA17P1-201ENST00000416656 452 ntBASIC3.49□□□□□ -1.85
LDB3O75112 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 MTCO2P11-201ENST00000431069 680 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC104850.1-201ENST00000435940 476 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB3O75112 RABEPKP1-201ENST00000440529 1026 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 RPL17P49-201ENST00000443728 411 ntBASIC3.49□□□□□ -1.85
LDB3O75112 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 C1DP4-201ENST00000455429 424 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AP1S2P1-201ENST00000457344 379 ntBASIC3.49□□□□□ -1.85
LDB3O75112 RN7SL93P-201ENST00000463035 293 ntBASIC3.49□□□□□ -1.85
LDB3O75112 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB3O75112 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 HMGB1P29-201ENST00000505659 499 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AP004371.1-201ENST00000525240 214 ntBASIC3.49□□□□□ -1.85
LDB3O75112 OR4P1P-201ENST00000530808 1136 ntBASIC3.49□□□□□ -1.85
LDB3O75112 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.49□□□□□ -1.85
LDB3O75112 GLYCAM1-201ENST00000546596 285 ntBASIC3.49□□□□□ -1.85
LDB3O75112 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB3O75112 SETP2-201ENST00000553886 926 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.49□□□□□ -1.85
LDB3O75112 AC093227.2-201ENST00000589357 285 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC060780.3-201ENST00000589464 80 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC020914.4-201ENST00000597690 277 ntBASIC3.49□□□□□ -1.85
LDB3O75112 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB3O75112 AL391813.2-201ENST00000609113 322 ntBASIC3.49□□□□□ -1.85
LDB3O75112 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
LDB3O75112 PISRT1-201ENST00000626175 531 ntBASIC3.49□□□□□ -1.85
LDB3O75112 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB3O75112 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB3O75112 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LDB3O75112 AC027287.1-201ENST00000553115 1453 ntBASIC3.48□□□□□ -1.85
LDB3O75112 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB3O75112 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB3O75112 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
LDB3O75112 Y_RNA.1-201ENST00000352915 104 ntBASIC3.48□□□□□ -1.85
LDB3O75112 SNORA31-201ENST00000362607 130 ntBASIC3.48□□□□□ -1.85
LDB3O75112 RNA5SP189-201ENST00000364920 115 ntBASIC3.48□□□□□ -1.85
LDB3O75112 RNU6-1103P-201ENST00000384150 107 ntBASIC3.48□□□□□ -1.85
LDB3O75112 MIR134-201ENST00000385258 73 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC245054.1-201ENST00000420944 258 ntBASIC3.48□□□□□ -1.85
LDB3O75112 RPL21P109-201ENST00000422213 475 ntBASIC3.48□□□□□ -1.85
LDB3O75112 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB3O75112 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AC108734.1-201ENST00000439549 399 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AL359073.1-201ENST00000448036 403 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC099563.1-201ENST00000456086 418 ntBASIC3.48□□□□□ -1.85
LDB3O75112 ST13P14-201ENST00000474095 734 ntBASIC3.48□□□□□ -1.85
LDB3O75112 HMGN1P12-201ENST00000499125 195 ntBASIC3.48□□□□□ -1.85
LDB3O75112 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 KCTD9P5-201ENST00000504141 1170 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB3O75112 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
LDB3O75112 RNU6-201P-201ENST00000517100 61 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC023632.4-201ENST00000517783 191 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AP004242.1-201ENST00000533701 349 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB3O75112 AC007424.1-203ENST00000554613 687 ntBASIC3.48□□□□□ -1.85
LDB3O75112 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 AC008752.3-201ENST00000588113 712 ntBASIC3.48□□□□□ -1.85
LDB3O75112 CKS1BP3-201ENST00000600888 237 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC016727.1-205ENST00000605437 569 ntBASIC3.48□□□□□ -1.85
LDB3O75112 RNU1-30P-201ENST00000606575 163 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC011816.2-201ENST00000607089 556 ntBASIC3.48□□□□□ -1.85
LDB3O75112 OR10AB1P-201ENST00000609613 938 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
LDB3O75112 AC010338.1-201ENST00000621823 717 ntBASIC3.48□□□□□ -1.85
LDB3O75112 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB3O75112 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB3O75112 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB3O75112 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB3O75112 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 AC092125.1-201ENST00000562568 1995 ntBASIC3.47□□□□□ -1.85
LDB3O75112 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB3O75112 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 GNG5P1-201ENST00000255500 204 ntBASIC3.47□□□□□ -1.85
LDB3O75112 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB3O75112 CBX3P1-201ENST00000325243 554 ntBASIC3.47□□□□□ -1.85
LDB3O75112 Y_RNA.46-201ENST00000362695 102 ntBASIC3.47□□□□□ -1.85
LDB3O75112 RNA5SP124-201ENST00000362739 110 ntBASIC3.47□□□□□ -1.85
LDB3O75112 Y_RNA.159-201ENST00000363674 87 ntBASIC3.47□□□□□ -1.85
LDB3O75112 Y_RNA.160-201ENST00000363677 92 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms