Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX3O60493 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX3O60493 AC012414.6-201ENST00000568241 401 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AL356432.3-201ENST00000568952 465 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX3O60493 AC010620.1-201ENST00000601088 1102 ntBASIC3.13□□□□□ -1.91
SNX3O60493 U73023.1-201ENST00000603134 700 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AL590229.1-201ENST00000603497 542 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC010591.1-201ENST00000603941 649 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC004908.2-201ENST00000609090 574 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC108747.1-201ENST00000609508 535 ntBASIC3.13□□□□□ -1.91
SNX3O60493 MIR7851-201ENST00000610611 160 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC004696.1-201ENST00000614345 607 ntBASIC3.13□□□□□ -1.91
SNX3O60493 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNX3O60493 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX3O60493 LRRC77P-213ENST00000637727 880 ntBASIC3.13□□□□□ -1.91
SNX3O60493 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX3O60493 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX3O60493 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNX3O60493 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX3O60493 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SNX3O60493 SPRR2C-201ENST00000290702 219 ntBASIC3.12□□□□□ -1.91
SNX3O60493 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNX3O60493 U8.11-201ENST00000384699 133 ntBASIC3.12□□□□□ -1.91
SNX3O60493 U8.12-201ENST00000384701 133 ntBASIC3.12□□□□□ -1.91
SNX3O60493 SNORD17-201ENST00000390930 237 ntBASIC3.12□□□□□ -1.91
SNX3O60493 SNORD115.1-201ENST00000391109 76 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX3O60493 AC018630.2-202ENST00000422992 927 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL353777.1-201ENST00000425552 326 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.12□□□□□ -1.91
SNX3O60493 AC244035.1-201ENST00000430042 390 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX3O60493 AC129850.1-201ENST00000436203 508 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC092641.1-201ENST00000440229 772 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX3O60493 MTND2P22-201ENST00000444325 1033 ntBASIC3.12□□□□□ -1.91
SNX3O60493 U8.18-201ENST00000459285 133 ntBASIC3.12□□□□□ -1.91
SNX3O60493 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
SNX3O60493 RPL23AP41-201ENST00000484754 458 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL049874.1-201ENST00000489560 388 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX3O60493 AL359273.1-201ENST00000510918 627 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX3O60493 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AL356057.1-201ENST00000533798 831 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX3O60493 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX3O60493 AP005205.1-201ENST00000563503 508 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC005951.2-201ENST00000576282 495 ntBASIC3.12□□□□□ -1.91
SNX3O60493 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AC053481.4-201ENST00000583164 216 ntBASIC3.12□□□□□ -1.91
SNX3O60493 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 AP001981.2-201ENST00000603241 418 ntBASIC3.12□□□□□ -1.91
SNX3O60493 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 AC073114.1-201ENST00000612027 490 ntBASIC3.12□□□□□ -1.91
SNX3O60493 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX3O60493 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
SNX3O60493 MIR6733-201ENST00000635723 61 ntBASIC3.12□□□□□ -1.91
SNX3O60493 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX3O60493 ELL2P3-201ENST00000457883 1602 ntBASIC3.11□□□□□ -1.91
SNX3O60493 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 AP001148.1-201ENST00000624124 2359 ntBASIC3.11□□□□□ -1.91
SNX3O60493 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX3O60493 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX3O60493 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX3O60493 RPL32P3-201ENST00000359025 275 ntBASIC3.11□□□□□ -1.91
SNX3O60493 U3.4-201ENST00000363352 213 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AL109755.1-201ENST00000401791 649 ntBASIC3.11□□□□□ -1.91
SNX3O60493 Y_RNA.608-201ENST00000410647 95 ntBASIC3.11□□□□□ -1.91
SNX3O60493 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC008850.1-201ENST00000427546 362 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX3O60493 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 HSFY6P-201ENST00000445573 403 ntBASIC3.11□□□□□ -1.91
SNX3O60493 USP9YP12-201ENST00000450481 570 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 AC009220.1-201ENST00000451614 275 ntBASIC3.11□□□□□ -1.91
SNX3O60493 RNU7-59P-201ENST00000459101 61 ntBASIC3.11□□□□□ -1.91
SNX3O60493 RPL21P41-201ENST00000459863 264 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC092754.2-201ENST00000463506 460 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AL049714.1-201ENST00000466686 347 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 OR5BM1P-201ENST00000512021 366 ntBASIC3.11□□□□□ -1.91
SNX3O60493 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX3O60493 FABP5P5-201ENST00000515537 406 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms