Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC136624.4-201ENST00000573044 370 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 MIR4489-201ENST00000578869 62 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 CYCSP1-201ENST00000604815 315 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 uc_338.28-201ENST00000612082 187 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AP005431.1-201ENST00000618479 319 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 SNORA43.4-201ENST00000629559 138 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AL132640.3-201ENST00000630473 177 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC116667.2-201ENST00000641075 823 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 CENPCP1-201ENST00000533085 2578 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AL672167.1-205ENST00000641112 3080 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC010329.5-201ENST00000623497 2174 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 Y_RNA.280-201ENST00000364765 112 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 RNU6-969P-201ENST00000383900 105 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 RNU6-905P-201ENST00000384434 107 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 MIR1203-201ENST00000408812 85 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 RNU6-603P-201ENST00000411403 107 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AL035660.1-201ENST00000422041 222 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 BX510359.3-201ENST00000422168 306 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC243964.1-201ENST00000441814 261 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AL445665.1-202ENST00000452436 324 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 RPS26P39-201ENST00000469206 341 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 RNA5SP54-201ENST00000516951 92 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 IGLV3-6-201ENST00000523937 250 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC004832.5-201ENST00000608677 401 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 MIR6793-201ENST00000612376 63 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC062022.1-201ENST00000451026 1684 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC232271.1-201ENST00000602455 2715 ntBASIC5.17□□□□□ -1.58
RNF223E7ERA6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF223E7ERA6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF223E7ERA6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 Y_RNA.245-201ENST00000364493 95 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AL355497.1-201ENST00000406262 551 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 U3.43-201ENST00000410734 213 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 RPL35AP31-201ENST00000418340 337 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 RPL17P36-201ENST00000420302 549 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC091390.3-201ENST00000426478 338 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 FTLP8-201ENST00000446770 267 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 ANP32BP2-201ENST00000454525 545 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 RPL30P12-201ENST00000474666 353 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC068522.1-201ENST00000482895 345 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 RNU6-436P-201ENST00000516171 114 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 RNU6-1061P-201ENST00000516530 99 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 IGKV2-19-201ENST00000518132 283 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC006380.1-201ENST00000603598 186 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 AC015726.2-201ENST00000620112 122 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms