Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC092436.1-201ENST00000506450 503 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC025465.4-201ENST00000513422 638 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AP001029.3-201ENST00000588063 596 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC136601.2-201ENST00000604356 474 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC008945.2-201ENST00000606056 604 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SDR42E1P2-201ENST00000614861 481 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC011155.2-201ENST00000623202 216 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC025034.2-201ENST00000623264 286 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RNA5SP453-201ENST00000362503 119 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 SNORA7.2-201ENST00000364446 145 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RNU6-1029P-201ENST00000384109 107 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RPL21P17-201ENST00000397467 475 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RPL12P9-201ENST00000412942 488 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC138761.5-201ENST00000433967 325 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC099670.2-201ENST00000435130 321 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 MTND4LP16-201ENST00000440828 295 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 USP9YP8-201ENST00000441913 500 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 MTND1P18-201ENST00000448191 573 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC012671.1-201ENST00000451912 203 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RPL32P34-201ENST00000486380 400 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC078918.1-201ENST00000498515 228 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 EIF4EP3-201ENST00000498782 656 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC046134.1-201ENST00000514454 666 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 RNA5SP503-201ENST00000517047 117 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC008489.1-201ENST00000524271 483 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 OR5AL2P-201ENST00000532185 920 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 MIR4424-201ENST00000585257 86 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC018638.8-201ENST00000588755 281 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC010133.1-201ENST00000615809 842 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC104260.1-201ENST00000616660 539 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC010338.1-201ENST00000621823 717 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC099654.5-201ENST00000636479 350 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AL354685.2-201ENST00000448218 1447 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 AC009643.2-201ENST00000603543 1448 ntBASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC85CA6NKD9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 OR4G1P-203ENST00000641984 1631 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AL157700.1-201ENST00000561973 1432 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 Y_RNA.70-201ENST00000362886 110 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 SNORA5.1-201ENST00000384275 131 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC114491.1-201ENST00000416095 246 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AL513185.2-201ENST00000425543 193 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 ATP5JP1-201ENST00000431631 322 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AL159987.2-201ENST00000432754 307 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 HSPD1P21-201ENST00000436541 245 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 HMGN1P12-201ENST00000499125 195 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC091951.2-201ENST00000500762 203 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC091885.1-201ENST00000506658 268 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 KLHL2P1-201ENST00000508691 521 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 SNORA31.3-201ENST00000516029 96 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 RNU6-875P-201ENST00000516488 106 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms